Gene Jann_0314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0314 
Symbol 
ID3932753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp321420 
End bp322151 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content62% 
IMG OID637902658 
ProductABC transporter related 
Protein accessionYP_508256 
Protein GI89052805 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA TCACAGTGGA AAACCTGAGC GTCCGCTACG GCGCGAACAC CGTCTTGCGC 
AATGTCGCGT TGACCGTTGA ACCCGGTGAG ATCGTGACGA TTGTCGGCCC CAACGGGTCG
GGTAAGACGA GCCTGCTCAA AGCCATCATC GGCGCGGCGC GGCCAGCGGC AGGGCAGGTG
ACCCTGAGGC CCGGTTTGCG GATCGGGTAT GTGCCACAAA GGCTGCATAT CGATGCGACT
CTACCGATCA CCGTGGAACG CTTCATGGGC CTGACCGCCC GGGTGACGCG GGAGGATTGC
ATGGCGGCGT TGAAGATCGC TGCGGTCCCG GACCTGCTGA AACGGCAGAT GTCCCAATTG
TCAGGTGGGC AATTTCAGCG GGTGCTGCTG GCGCGGGCCT TGATCAACAA ACCGGACGTC
CTGCTTCTGG ACGAGGCGAC ACAGGGCTTG GACCAGCCCG GATCGGCCGC GTTTTATCGA
CAGATCGAGG ATGTACGGCG CGAAACCGGC TGCGCGGTGC TGATGATCAG CCATGAGCTT
CACGTTGTCA TGAGTGCGTC GGACCGGGTC ATCTGTCTGA ACGGCCACGT ATGCTGTGCC
GGAACACCCG CCGTGGTGGC ATCCGCGCCC GAATATCGCG CGCTGTTTGG GACCGGGACG
GGCGGGGCTT TGGCGCTGTA CCGGCACGAC CATGATCACA ATCATGACCA TGACCACGAG
GCTGCCGAGT AA
 
Protein sequence
MSLITVENLS VRYGANTVLR NVALTVEPGE IVTIVGPNGS GKTSLLKAII GAARPAAGQV 
TLRPGLRIGY VPQRLHIDAT LPITVERFMG LTARVTREDC MAALKIAAVP DLLKRQMSQL
SGGQFQRVLL ARALINKPDV LLLDEATQGL DQPGSAAFYR QIEDVRRETG CAVLMISHEL
HVVMSASDRV ICLNGHVCCA GTPAVVASAP EYRALFGTGT GGALALYRHD HDHNHDHDHE
AAE