Gene Jann_0313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0313 
Symbol 
ID3932752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp320905 
End bp321423 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content62% 
IMG OID637902657 
Productferric uptake regulator family protein 
Protein accessionYP_508255 
Protein GI89052804 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGTG ACGCGCGCTC TCAAGACGCG GGAAATGATA CGCCTCTTGG GTTCCAAAAT 
CATGATCACA GGGCGTGTGT GGCGGACGCG CTGGCCTCGG CCGATGCGCG CAGCACGGCG
GAGGGACTGC GACTGACCCC GGTGCGGCGA AAGGTTCTGG AGCTGTTGTT GCAGGAACAC
CGTGCGCTTG GGGCCTATGC GATCCTTGAT CTACTGCGCG ATGCCGGGTT CGGATCACAA
CCGCCTGTGG CCTACCGCGC GCTGGATTTT CTTGTTGAGA ACGGGTTTGT CCACAAAATC
GAGCGTCTGA ACGCGTTTGT GGCATGCGCC CATCCCGGTC AAACCCACTC GCCTGCCTTC
ATGATTTGTC GCAAATGCGA TGCGGTGGCC GAGGCGCATT CCGCACCGGC GAAAGGGGCG
CTTGGAGCGG CTGCACGGGC CACCGGCTTC CAGATTGAAC GAACCGTGGT AGAGGCCGAA
GGGGTGTGCC CCGCCTGTGT CGAAAAGGAC GAGGCATGA
 
Protein sequence
MTSDARSQDA GNDTPLGFQN HDHRACVADA LASADARSTA EGLRLTPVRR KVLELLLQEH 
RALGAYAILD LLRDAGFGSQ PPVAYRALDF LVENGFVHKI ERLNAFVACA HPGQTHSPAF
MICRKCDAVA EAHSAPAKGA LGAAARATGF QIERTVVEAE GVCPACVEKD EA