Gene Jann_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0307 
Symbol 
ID3932745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp314253 
End bp315032 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content65% 
IMG OID637902650 
ProductABC transporter related 
Protein accessionYP_508249 
Protein GI89052798 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCG AGGTGATCTG CAAAGCGCTC GCCAAGACCT ACCGGGGTGG GGTGGAGGCG 
GTGCGTCCGC TGGACCTGAC CTTGGCGTCG GGCCAGACCA CCGCGCTTGT CGGGCCGTCT
GGCTGCGGCA AGTCCACGGT GTTGCGGATG ATTGCCGGGC TGGAAGATCC ATCCGGCGGA
GAGATCACCA TCGGCGGGGC ACCGCCCGCA GATACGTTAC GCAAAGCGGG GCTGTCTGTG
GCGTTCCAGG ACCCGTCCCT TTTGCCGTGG CGCTCGGTTC GCGGTAATAT TGAGCTGGCA
TTGACCTTGG CGCGACGTCC CGTGGATGCA GTGGAGGTCG ATCAATTGAT CCACCTCGTG
GGCCTCGATG GGTTTGCAGA CACGCGCCCG GCGGAATTGT CGGGCGGTAT GCGACAGCGC
GCTGCGATGG CCCGCGCCCT TGCCACGCAA CCGGGCTTGC TGCTGCTGGA TGAGCCGTTT
GGCGCGGTGG ATGAGCTGAC CCGTCAGCAA CTTGCCAATG ATCTGCCGGG TATTTGGGAA
GCGCGCGGCA CAACGACAGT CCTCGTCACC CATTCAGTGA GTGAGGCTGT GTTGTTGAGC
GACCGCGTCG TCGTTTTATC GCCCCGGCCC GCGCGGATCG TGGCGGATAT CGCGATAGAC
CTTCCCCGGC CCCGGCGGTC AGAGATCACC CGAACGCCCG CCTTCACGGA TCTGGTTGAA
GCTGTCTTCG CCGCGCTCTC GGAAGGGATG GCGGAGACAA TGCCGAAGGC CGCGCAATGA
 
Protein sequence
MSSEVICKAL AKTYRGGVEA VRPLDLTLAS GQTTALVGPS GCGKSTVLRM IAGLEDPSGG 
EITIGGAPPA DTLRKAGLSV AFQDPSLLPW RSVRGNIELA LTLARRPVDA VEVDQLIHLV
GLDGFADTRP AELSGGMRQR AAMARALATQ PGLLLLDEPF GAVDELTRQQ LANDLPGIWE
ARGTTTVLVT HSVSEAVLLS DRVVVLSPRP ARIVADIAID LPRPRRSEIT RTPAFTDLVE
AVFAALSEGM AETMPKAAQ