Gene Jann_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0304 
Symbol 
ID3932742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp310641 
End bp312260 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content63% 
IMG OID637902647 
Producthypothetical protein 
Protein accessionYP_508246 
Protein GI89052795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGACTCC TTCGGCTCGC GATTGCGGCG CTGATCCTGT TCCTGGTGCT CATCCAACCG 
AACCATCCCG CCGCCCTCGC GTGGGGCGCG CTTGGTGTTT TTCCTCTGGA GCTGCCCGCG
ATCCTTCTGG CGATGATCGC GTTTGGCAAG GGGCGCATCG GGCGGGTAAT CCGTCTGCTC
CTGACGATTG TGCTGGTCTT CGTCGCAATC CTCAAGACCG CGGACATCAT CATGTTCGAC
GCGCTGTCGA GGGGCTTCAA CCCGGTCGCG GATCTGCCAT TGATCGACGC GTTCATCCGG
TTGCTGTCTG GCACCCTCGG TCCGGTTCTG ACGGGTGCGG CCTCTATCGG CGCGGTTCTT
GTCGCGGTAC TGATTGCCTG GCTGATCTGG TGGGCATTGG GCGTTTGGTC TCGGGTCAGC
GTGCGGCCCT GGCTGGCGCG CGGGTCCGGT TTGGCGGCGG CCGTGACCAC ACTTCTCGTC
ATTGCTGAAG CAGGTGACAC GATGGGCCAG TGGGACCTTC CGGCGCAGCC GCCTGGCACG
GCCTTCACCG CGCGCCTGGG CGCAGAGCGT GTGGGTATGA TCCGGCGGAC CATCATAGAG
CTGCGCGCCT TCCGGGACGA GGTGGCCAAT GATCCGTTCA CGGGTGCCGA TGGCCTCTTT
GCCCAGATCG ACCGTGATGT TCTGATCATC TATGTCGAAA GTTATGGTCG GACGAGCTTT
GACACACTCT TCTACGCGGA CCTGCACCGG GAGACGCTTG CCACCTATCA GGCGCGTCTG
GGTGATCTGG GGCTGAGCAT GCAGTCGGGA TTTCTGGCCT CCCCCACCCA TGGCGGGCAA
AGCTGGCTTG CCCATTCCAC CGTCGCCAAT GGCATGTGGA TCGACAACCA GGTGCGGTAT
GCGGCGGCGC TGTCCAGCGG GCGGGAAACG CTGTTCCACC ATGCCGCCAA CGCGGGGCTG
CGCACTGCAA CGGTGATGCC GCAAATCACC CTCGACTGGC CCGAGGCGCT TGTGATGGGG
TTCGAGGAGA TCCTGACATT TGACGATTTG GGGTATGAGG GCTTGCCGTT CAATTGGGTC
ACGACGCCAG ATCAATTCAC CCTGGCTGCG CTGGACCGGT TGCTGCGGGA CGCAAATGAC
CCCCGGCACC TGCTCGCGCA GGTCGCGCTG ATCTCCTCCC ACGCGCCCTG GGTGCCGGTC
CCCGAGATTG TTCCTTGGGA GGACATCGGC GACGGCACCA TTTTCAATGA GATTGCGGCG
TCCGGCGACA CGCCCGCCGT CGTGTGGCGG GACAGGGAGC GGGTGCGGTT CCAATATCGT
CTTGCCGTGG ATTATGCGTT ACAGGCGGTG TTCGAATATG CCGTGCTCCA CGCGGACGAT
CCGCCGCTGA TGGTGGTGAT CGGCGATCAT CAGGCGGCGT CCTCCATCGG TCTGGATGAG
CGGCGCGAGG TCCCCATTCA CATCATTGGG CCTGACGCTT TGGTCAGCGC TTTAGGCGAG
ATTGCGCCCA GTGGCGGTCT TTTGCCGGAT GAAAACGCGG GCGTCATTCC CATGGACGCC
CTGCGTGATA TCTTCCTTGA AGCATATTCC GACGCGCCGG ATCAAAGGAG GGGCGAGTGA
 
Protein sequence
MRLLRLAIAA LILFLVLIQP NHPAALAWGA LGVFPLELPA ILLAMIAFGK GRIGRVIRLL 
LTIVLVFVAI LKTADIIMFD ALSRGFNPVA DLPLIDAFIR LLSGTLGPVL TGAASIGAVL
VAVLIAWLIW WALGVWSRVS VRPWLARGSG LAAAVTTLLV IAEAGDTMGQ WDLPAQPPGT
AFTARLGAER VGMIRRTIIE LRAFRDEVAN DPFTGADGLF AQIDRDVLII YVESYGRTSF
DTLFYADLHR ETLATYQARL GDLGLSMQSG FLASPTHGGQ SWLAHSTVAN GMWIDNQVRY
AAALSSGRET LFHHAANAGL RTATVMPQIT LDWPEALVMG FEEILTFDDL GYEGLPFNWV
TTPDQFTLAA LDRLLRDAND PRHLLAQVAL ISSHAPWVPV PEIVPWEDIG DGTIFNEIAA
SGDTPAVVWR DRERVRFQYR LAVDYALQAV FEYAVLHADD PPLMVVIGDH QAASSIGLDE
RREVPIHIIG PDALVSALGE IAPSGGLLPD ENAGVIPMDA LRDIFLEAYS DAPDQRRGE