Gene Jann_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0297 
Symbol 
ID3932735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp304036 
End bp304479 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID637902640 
ProductMarR family transcriptional regulator 
Protein accessionYP_508239 
Protein GI89052788 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGC ACGAAGATCC TCTTTCCGTT GCGCTGTTCA GCGAGGTCTT CATGATCGAC 
CAGCTGGCGC GCGCGCGGCT GTCGAAGGCT TTGCCCAAGG GGATGGAGCT GAGCCATTTT
TCCGTGCTCA ACCATCTTGC CGCGACCCAG GAAGAAAAAT CACCCGCGCA ACTGGCCCGG
GCCTTTCACC TGACCCGTGG CGCAATGACC AACACGCTCA ACAAGCTGGA ATGGGCGGGC
CACATTCATG TGCGGCCCGA TTGGGACGAT GCGCGGCGCA AGATGATTTC GATCAGCCCG
GCCGGTCGTC GCGCCCGTGA GGCGGCGATT TCCGCGATCG TACCGATTCT GACAGAAGCC
GTGGCCGAAA TCGGGCCGGG CAGGGTTCGC GATACCCTCC CCCTCCTGCG CGACGTGCGC
CGAAAGCTGG AGGATGAAGG CTAG
 
Protein sequence
MSKHEDPLSV ALFSEVFMID QLARARLSKA LPKGMELSHF SVLNHLAATQ EEKSPAQLAR 
AFHLTRGAMT NTLNKLEWAG HIHVRPDWDD ARRKMISISP AGRRAREAAI SAIVPILTEA
VAEIGPGRVR DTLPLLRDVR RKLEDEG