| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0293 |
|---|
| Symbol | hemH |
|---|
| ID | 3932731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 300891 |
|---|
| End bp | 302003 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637902636 |
|---|
| Product | ferrochelatase |
|---|
| Protein accession | YP_508235 |
|---|
| Protein GI | 89052784 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0276] Protoheme ferro-lyase (ferrochelatase) |
|---|
| TIGRFAM ID | [TIGR00109] ferrochelatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.523161 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGA TGCCAGCCGG AGATGCGCCA GCACTGATGG ATACAGATGC GCCAGCTTTG
ACGACGACGG ATGCGCCAGC CCTCGCCCAC GCGCCCTCGG ACCACCCTCG GGTGAAAATG
GGGAAGGTGG GTGTGCTTCT GGCCAATCTC GGCACGCCGG ACAATTACGA CTATTGGTCC
ATGCGCCGCT ATCTGAACGA GTTTCTCAGT GACAAGCGCG TCATCGACTA CAGCCCGTGG
ATCTGGCAGC CATTGCTGCA ACTGGTGATC CTGAGCAAAC GCCCGTTCAG CTCGGGCGCG
GCATATAAAT CGATCTGGAA TCATGAGGCC GGTGAATCGC CCCTGGCCAC GATCACCAAG
GACCAGACCG CAAAGATGAA GGCGTTGATG GCCGACCGGT ACGGCGACGA TGTCGTGGTC
GATTACTGCA TGCGCTACGG CAACCCGTCC ACCAAGTCGA AGGTGGATGA ACTTGTCGCC
CAGGGCTGTA CCAAGATCCT GTTTTTCCCG CTTTACCCGC AATATGCGGG CGCGACCTCG
GCCACCGCGT GTGATCAGTT CTTCCGCTCG CTGGAGAACA TCAAATGGCA GCCGCAGGTG
CGCACGGTGG AGCCCTATTA TGCCAACCCG CTCTATATCG ACGCGCTGGC GCAATCGATT
GAGCGGGCCT ACGCCGCGAT GGACGTGAAG CCCGATCTTC TGGTGACCAG CTACCATGGC
GTGCCGAAGC GGTATTTGAT GGAGGGCGAC CCCTATCATT GCCAATGCCA GAAGACCTCA
CGCCTGTTGA AAGAGCGTCT GGGGTGGGAC GACACGCAGA TCGTCACGAC CTTTCAATCG
AAATTCGGTC CCGAGGAATG GCTTCAGCCC TACACGGTGG AAGAGGTCGC GCGGCTGGCT
GAGAAGGGCA AGAAACGCAT CGCCGTCTGT GCGCCCGCAT TCTCTGCCGA TTGCATCGAG
ACACTGGAAG AGATCAACGA AGAGATTCGC GAGAGTTTCG AGGAAGCGGG CGGCGAGAGC
TTCACGTATA TCCCATGCCT CAACGACGAT GACGCGCATA TGAACGCGTT GGCCACTGTG
GTGGACGACA ACCTGCGTGG TTGGATCGGC TAA
|
|---|
| Protein sequence | MNMMPAGDAP ALMDTDAPAL TTTDAPALAH APSDHPRVKM GKVGVLLANL GTPDNYDYWS
MRRYLNEFLS DKRVIDYSPW IWQPLLQLVI LSKRPFSSGA AYKSIWNHEA GESPLATITK
DQTAKMKALM ADRYGDDVVV DYCMRYGNPS TKSKVDELVA QGCTKILFFP LYPQYAGATS
ATACDQFFRS LENIKWQPQV RTVEPYYANP LYIDALAQSI ERAYAAMDVK PDLLVTSYHG
VPKRYLMEGD PYHCQCQKTS RLLKERLGWD DTQIVTTFQS KFGPEEWLQP YTVEEVARLA
EKGKKRIAVC APAFSADCIE TLEEINEEIR ESFEEAGGES FTYIPCLNDD DAHMNALATV
VDDNLRGWIG
|
|---|
| |