| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0286 |
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| Symbol | radC |
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| ID | 3932724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 291578 |
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| End bp | 292351 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902629 |
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| Product | DNA repair protein RadC |
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| Protein accession | YP_508228 |
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| Protein GI | 89052777 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2003] DNA repair proteins |
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| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.697565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATC AGCCTGCGTT TACCTTCGAT GAAGCCTCAC CAGAGTTTGT GGATGCCACG
CTGGTCGCAC CGCGCAAGGC GGGTGGCCCT TCCAAGGGGG CAGAGGCGCA TCGCCACAAA
CATCGTGATC GCTTGCGGCA ACGTTTTACG GACGGTGGCG CAGATGCCGT GCCGGATTAT
GAGCTGCTGG AAATGGTCCT CTACGGGGCG ATTCTGCGGG GCGACACAAA ACCGCTCGCC
AAACGCCTGA TTGATCGGTT CGGAGATCTG AACCGCGTTC TGGCCGCCCC CGTCGCCCGC
CTGAAAGAGG TGGAGGGCGT CGGCGACAAG GTCGTCTTCC AACTGAAGCT GATCGAAGCC
ACGGGTCACC GCATGGCCCG CGCCAAGGTG ATGCAGAAGC CGATCCTGTC ATCATGGGAC
GCGCTGCTGG CGTATTGTCA GACGGCCATG GCCCACCGCG ATCTGGAGCA GTTCCGCGTT
CTCTACCTCG ACCGCAAGAA CGTGCTTGTG GCCGACGAGG CGCAAGCCGA TGGGACGGTG
GACCACGTCC CAGTCTACCC GCGGGAGGTC ATCAAACGCG CGCTGGAACT CAATGCGACC
GCCCTTATTC TGGTCCACAA TCATCCCTCA GGCGATCCGA CGCCGTCGGA GGCGGACGTG
CAGATGACCA TGGCGATCCG GGATGCGGCA GACGTCTTCA ACATCGCCAT CCATGACCAT
CTGGTGATCG GCAAAGCGCG GGAGTTGAGT TTCCGCGCGG AAGGTTACCT TTAG
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| Protein sequence | MSDQPAFTFD EASPEFVDAT LVAPRKAGGP SKGAEAHRHK HRDRLRQRFT DGGADAVPDY
ELLEMVLYGA ILRGDTKPLA KRLIDRFGDL NRVLAAPVAR LKEVEGVGDK VVFQLKLIEA
TGHRMARAKV MQKPILSSWD ALLAYCQTAM AHRDLEQFRV LYLDRKNVLV ADEAQADGTV
DHVPVYPREV IKRALELNAT ALILVHNHPS GDPTPSEADV QMTMAIRDAA DVFNIAIHDH
LVIGKARELS FRAEGYL
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