| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0274 |
|---|
| Symbol | |
|---|
| ID | 3932712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 280665 |
|---|
| End bp | 281696 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637902617 |
|---|
| Product | 4Fe-4S ferredoxin, iron-sulfur binding |
|---|
| Protein accession | YP_508216 |
|---|
| Protein GI | 89052765 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1600] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | [TIGR00276] iron-sulfur cluster binding protein, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.097204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCGATC TGAAAGACGC CCTTCGGACC GAGGCCCTTG ATGCGGGCTT TGCAAAGATG
GGGGTTTGCA GCCCAAATGC GGTGCCCGAA ACGGCGGCGC GGCTGAAAGC GTTTGTGGAC
GCTGGCTTTC ATGGGCAGAT GGGATGGATG GCGGAGCGGA TGCACTGGCG CGGGGATGCG
TCTGCGTTGT GGCCAGAGGC GAAGTCTGTC GTGATGCTAG CCGAGCCATA CACCCCGGAC
AGCGATCCCC TCGACGCACT GGCACGGAAG GATCGCGCCA CAATCAGCGT CTACGCCCAG
GGGCGTGACT ATCATGATCT GGTCAAGAAG CGGCTCAAAC GCGTCGGGAG ATGGCTGCTG
GCGCAATGTC CGGGAGAACA GATCAAGGTC TTCGTCGACA CCGCCCCAGT TATGGAGAAG
CCCTTGGCAC AAGCGGCAGG GCTGGGGTGG CAGGGTAAGC ACACCAATCT GTTGGCGCGC
GATCTGGGGA ACTGGGTTTT TTTGGGTGCA ATCTTCACAA CGGTTGAGTT GCCAATCGAT
GAACCAGAGG CAGAGCATTG CGGCAGCTGC ACCGCTTGCC TTGATATCTG CCCCACAAAT
GCGTTTCCCG CGCCGTTCCA ACTGGACGCG CGCAAGTGCA TTTCCTACCT GACGATTGAG
CATAAGGGGC CAGTCGACCT GGCCCTTCGG GCAAAATTGG GCAACCGGAT CTATGGCTGC
GATGATTGCC TGGCCGTCTG TCCATGGAAC AAATTTGCGC AGACCGCGCG GGATATTCGC
TACGCTCCTC GGGACGATCT ACGATCTCCC CTCCTCGCAG ATTTGGCTGC GCTGGATGAT
GCCGGATTCC GAGCGCGCTT TTCAGGCTCT CCTATCAAGC GGATTGGACG TGATCGGTTC
GTGCGCAATA TCCTCTATGC GATTGGCAAT TCCGGGCAGG CCAAGCTGGT GGACGCCGCC
CGGCCTTTGA CGGATGATCC GGATGTGGCC GTCGCAGATG CGGCACGGTG GGCGATGGAG
AGGTTGCTTT GA
|
|---|
| Protein sequence | MTDLKDALRT EALDAGFAKM GVCSPNAVPE TAARLKAFVD AGFHGQMGWM AERMHWRGDA
SALWPEAKSV VMLAEPYTPD SDPLDALARK DRATISVYAQ GRDYHDLVKK RLKRVGRWLL
AQCPGEQIKV FVDTAPVMEK PLAQAAGLGW QGKHTNLLAR DLGNWVFLGA IFTTVELPID
EPEAEHCGSC TACLDICPTN AFPAPFQLDA RKCISYLTIE HKGPVDLALR AKLGNRIYGC
DDCLAVCPWN KFAQTARDIR YAPRDDLRSP LLADLAALDD AGFRARFSGS PIKRIGRDRF
VRNILYAIGN SGQAKLVDAA RPLTDDPDVA VADAARWAME RLL
|
|---|
| |