| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0264 |
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| Symbol | |
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| ID | 3932702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 267157 |
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| End bp | 272568 |
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| Gene Length | 5412 bp |
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| Protein Length | 1803 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637902607 |
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| Product | alpha-2-macroglobulin-like |
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| Protein accession | YP_508206 |
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| Protein GI | 89052755 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.678468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGTG TTCTGGCGTT TTCTATCGGG GTCTTCATCT GCTTGGGATT GCCCCTCTCT
GCCCAGAATC TGCTGCCGGA TCGAACCACA CAGATCATCC GGGACACCGA CTTGCCCGGC
GGAGACCTGC GCCCGATTTT TGAAACCACC CTGACGGCCT GTAACGCCGC CTGCCAGGCC
GATCCCGATT GTAATGCCTT CACCTTCAAC GGCGTCAATA ACACCTGTTT CCCCAAGACG
GCTTCCGGCG ATCCGGTCCC TTACAGCGGC GCCCTTTCCG GACTAGTCCG CACCACTCCG
GACGCCGCCC ACGCCCTTGC GGAGAACCGG CGCCAGCAAC TTCCATTCCT GAACGACGCA
GATTTTGCGG AAGCGCTGGA TCAGGCCCGC ACCCTTGGGC TTGTCCATTA CGCGGGTCTC
TTCCCGGTCG ATGACTGGCG CTTGAGCGCG CGAAACGCCT TTGATGAAGA CAACGTCGTC
GGGGCCATGC GCCGTATGGG GGCCGCGATC ACCGTGGACG ACGACGGCGA CGACTGGCGC
GCCTATGCCA GCTACCTGCT CGCCATCGAG ACTGACAATT CCGGCGAACG TCGCCAGTTT
GAACGCCGTG CGCTGTCCGC CGCGATCAAT GCCGCCCTGC GCGCCACAGA TAGCGCAGAC
CTTGCCAACG CGCTGGACCT GATCGCCGAT GCCTTGGAGC GGCGCGGAAG GGGGCGCGAC
ACAATCCCGG CCCTGCGGCT GGCGCTTGCC GAAAGCCCCT TGCAGGCAAG GGATGACGCG
CTCGACCGTG TCCTGGGTCT TTACGGCTTC CGCGTCACCG ACACCCGCGT CGATGTGGAG
GCTGACTTTC CCCGCATCTG CGCCGAATTC TCGGAACCCC TCGCGGCGGG GGGCGTGATC
TATGACGACT TCCTGCAAAC GACTCTCTCT GATCTGGCGG TGGAGGCCGA TGGCCGTCAG
CTTTGCCTGT CCGGTGTGCG CCATGGGGAG CGGTATGAAT TCACCCTGCG TGCCGGTCTG
CCGGCGGCCT CCGGTGAGGT GCTGCACGCG CCCATCACGC TACGCCAATA TGTGCGTGAC
CGCGCGCCGT CGGTCCGCTT TGCAGGCCGC GCCTACATCC TGCCCGCGTC CGAGGGGGGC
ACTATTCCCG TCGTCGGCGT CAACACCGAC CTCATCGACC TGGCTCTGTT CCACGTGGCT
GACCGGAACA TTCTGCGCAC CTTGCAGGAG GACTACTTTG GCCGCCCCCT CGCCGAGTGG
CAGGTGGATC GCTTTGCCGA GGAGATTGGT GAAGCCGTTT GGCAAGGCGA GGCTGAGATC
GCGGTGGCGC AGAACCAAAG CGTTACCACC CGCGTGCCCG TGGGCGAAGT TCTGGAGGGC
CGCGCCCCAG GTCTCTATGC GTTGGAGGCG CGTGTTGGCG GCGCGGGCAC GTCCGAGGGC
GGGGCCACGC AATGGTTCCT TGTCAGCGAT CTGGGGCTGA CCGCGATGAG CGGGGCCGAT
GGTGTCCACG TGTTCGTGCG ATCCCTGGCC ACAACCGAAG CGCACGCAGG CACATCGGTC
GACCTGATCT CAGAATCGAA CCGCGTCTTG GCCACGTTAG AGACGGATTC CGAAGGCTAT
GCGCACTTCC CGGCAGCCAT TGCGGCGGGC GAGCAAGGGG CCGCCCCCGC GCTTCTGACG
GCGCGGCAGG GCGACATGGA CCTCGCCTTC CTATCCCTCC GCGATGCCGA ATTTGACCTG
TCTGACCGGG GTGTCGAGGG TCGTGCGCCC GCAGGTCCCA TCGATGTGTT CCTGACCACG
GATCGCGGCA TCTACCGCGC GGGCAATACG ATCCACCTGA CCGCCCTTGC CCGCGATCCT
CAAGCGCACG CAATCACCGA CCTGCCCCTG ACCGCGATCC TGACCCGGCC CGACGGTGTA
GAATTCACTC GCCTGCTGCT GGACGAATCT GGCGCGGGTG GCTTTGTCGC GTCCCTTCCC
CTCGGCGTCG ACGTGCCGCG CGGCACCTGG CGTCTGGGCA TCCACGCCGA CCCGGACGCG
CCGCCCCTGC GCGAGGTCCG CCTGCTGGTG GAGGACTTCC TGCCGGAACG TCTGGACCTT
GAGATTGAAT TGAACGCGGA CGCCGAGATG GCCTCGTTCC AGGCCGACTA CCTCTTCGGT
GCGCCTGCCG CCGATCTTCC CATCACGGGC CGCCTGGCTC TGCGACCTTT GTCGACGCTG
CCTGACTATC CAGGCTTCCG CTTTGGTCGC CACGACGCCC CGCCCGAGCC CGCATTTGAA
AGCATGGAAA CCCTCATGAC TGACGCCGAC GGCGCCGCGA GTGTCGGTCT GCGATTGCCC
ACATTCGACG GCGTCAGTCA TCCCGGCCAG CTGACCCTGA CTGCACAGAT CACCGAGGGC
TCTGGCCGTC CGGTGGAGCG GGCTGCGACC GCCACGATCC TTCCCGATGC GCCGCTGATC
GGCATCCGCC CACTCTTCGA TGGCACCTTG CCCGAAGGTG TGGAGGCCCC GTTCCACCTG
ATCACCATCG GCACAGATCC CATGCCGGTC CGCTGGACAC TCAACCGCGT GGAGCGCCGC
TACCAATGGT ACCGCCAGAG CGGCAACTGG ACGTGGGAAC CGGTAACCAC CCGCCAACAG
ATCGCCATCG GTGAGGCCAC GTTGACCGAT GAACCGACAT CGCTCGATCT GCCCATCGAA
TGGGGCACGT TTGAGCTGCG CGTTGAAAGT GACGCAGGCG GGTTCGCCGT CTCCTCCGTA
GGGTTCAGCG CAGGCTGGTA CGGGGCCAGT GACGGGACCG ATACGCCCGA CGCGTTGGAG
GTGTCTCTGG ATGCCGACGC CTATCGTCCC GGAGACACGG CGACGCTTCG TATCGTCCCA
CGCACCGGTG GACTTGCCCT GGTACAGGTC GTCACAGACC GTCTCATCGA TCAACAGATC
GTACAATTGG GCGATGACCC GCAAGACATC ACCCTGCCCG TGACCGACGA ATGGGGTGCC
GGTGCCTATG TCACAGCGAC CCTGATCCGC CCGTTAGAGA CGGCATCCGG GCCGGTGCCG
ACCCGCGCCA TCGGCCTCGC CCATGCCGCT GTCGCGCCCG GCCTTCGCGC ATTGGAAGCG
GCGCTGGAGG TGCCAGACAC CATGCGGCCC CGCGGTCCCA TGGACGTCGC CCTCCGCGTC
GACGGCGCAC TGCCGGGTGA GACCGTCTAC GCCACCATTG CCGCCGTTGA TCTGGGCATC
CTGAACCTCA CCGGGTTCGA TAGCCCTGAC CCGCAAGGGC ATTACTTCGG CCAACGCCGC
CTCGGCATGG CATTTCGCGA CATCTATGGC CGTCTGATCG ACAGCCGTGA CGGGGCGGAG
GGGCGCGTCC GCCAGGGCGG TGACGCGGGC GCAGGGCTAC GTATGCAGGC CGACCCGACG
TCCGAAGATC TCGTGGCGCT GTTCTCTGGC CCGCTGACCG TTGGCGCGGA CGGGTATGCG
CGCACCAGTT TCGACATGCC CGCCTTCAAC GGCACCATCC GCGTCATGGC CACCGCCTGG
AGCGACACGG GTATCGGGCA GGCCGAGGCG GACGTCATTG TCCGTGACCC CGTCGTCATC
GCCGCCAGTG CACCGCGCTT TCTCGCGCCC GGCGATACGT CTTCGCTGCT CCTGGAGATT
ACCCACACCG AAGGCCCTAC AGGCGAAATG GCGTTGGCCA TCGGAACCAC GCCAGAGATC
AGCATGTTTG GCCAAATCGT TCCCTCCGTC ACCTTGGCCG AGGGCGAAAG CACCCGCCTG
CGCATCCCCT TTGTCACCGC CGACCGCACC GGCCTGGCGG ACATCACCGT CACGCTGACC
ACGCCCGACG GCATCGATAT CATTCAAACC CTTACCATCC CGGTACAGTC CAATGACCCC
GAAGTGGCTG AAACCACGCG CCTGACCCTC GCCCCCGGCG AAAGTTTCAC GATTGATGCC
ACCGCGTTCA CCGGCTTCCA TCCTCAGGGC ACACGGGCGA TCCTGTCTGC GGGGCCACTT
GCCCGCTACG ATGTGGCGGG GCTTTTGCAG CGCCTTGACC GCTACCCCTA TGGCTGCACG
GAACAGACCG CCAGCCGGGC TTTGCCGCTT CTCTACCTGT CGTCCGTCGC AGAGGCGCTC
GACCTCGGCA CCGCCGAAGA CCTGAATATT CGCATCGAGG GCGCGATCGC CTCGGTCCTG
ACAAACCAGT CGGCCAACGG TGGCTTTGGC CTCTGGCGCG CGTCTTCGGG CGACCTGTGG
CTCGACGCTT ATGTGACCGA TTTCCTGTCC CGCGCGCGGG CAGAGGGGCA TTCCGTGCCT
GATATCCCCT TCCAGAACGC GCTCGATAAC CTCGCGAACG CCGTGGCCTC TCATCCCGAT
TTTGAGAATG GCGGGCAAGG ACTGGCCTAT GCGCTGATGG TTCTGGCGCG CGAGGGGCAG
GCCAGCATGG GCGACCTGCG CTACTACGCC GATGTCAAAG CGCCCGAATT TGCAACGGCC
CTCGCCTTGG GTCAGCTTGG CGCAGCGCTG GCAATGTATG GCGACCAACA GCGCGCCGAC
GCGATGTTCA TCGCAGGTTT CGCACGTCTG ACCTTGGCGG GATTGTCCGA GGAGCCCCGC
AGTTGGCGCG TGGATTATGG CAGCCACACG CGAGACGCAG CGGGGCTGAT CGCCTTGGCG
GCCAATGCCG GATCGCAGAC GATCAACCTG CCTGCCTATG TGGCCGACAT CACGCCGAAT
GTTGCAGACG CCTCCACGCA AGAGGCCGTC TGGGCGCTGC TGGCCGCCCA TGCCCTGATC
GACAATCCAA GCGCCGATGG GCTGATGCTG GATGGCGCGC CGGTTACCGG CCCCTATGTG
CGGGTCCTGG ACGATGCCCA GAGCCAAGCC CGCGTGTTGG AAAATACGGG AGATCGTGAC
GAAGTGGTCA CGCTGACCCG CTTTGGTCGC CCTGACGGCC CGACAGACGC CTTTGGCAAC
GGCTATCGCA TTGATCGCGA GTACCTGACG TTGGACGGCG ATCCGGTGGA TCCGACGCAA
GTCACCCAGG GCACACGCCT CGTGACTGTC CTGACCATTC GCAACACTGG CGCGCCAGAG
GGGCGCTTGA TGATCGACGA TCCGCTGCCC GCGGGGTTCG AGATCGACAA TCCCAACCTC
CTGCAATCGG GCGATATCCG CGCATTGGAC GGTGTGGATC TGCGCACCTC CCCAGAGATG
TCCGAATTCC GGGCGGAGCG GTTCCTGTCC GCCGTCAACA TGCGGGGCGC GGCGGATCAG
ATTCGCATGG CCTATATCGT GCGCGCGGTG TCGCCGGGCG AATTCCATCA TCCCGCTGCA
ATGGTTGAGG ATATGTACCG CCCGACATAT CGCGCGCAGA CGGCCTCTGG CCGGATAAGC
GTTGTGGAAT GA
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| Protein sequence | MTRVLAFSIG VFICLGLPLS AQNLLPDRTT QIIRDTDLPG GDLRPIFETT LTACNAACQA
DPDCNAFTFN GVNNTCFPKT ASGDPVPYSG ALSGLVRTTP DAAHALAENR RQQLPFLNDA
DFAEALDQAR TLGLVHYAGL FPVDDWRLSA RNAFDEDNVV GAMRRMGAAI TVDDDGDDWR
AYASYLLAIE TDNSGERRQF ERRALSAAIN AALRATDSAD LANALDLIAD ALERRGRGRD
TIPALRLALA ESPLQARDDA LDRVLGLYGF RVTDTRVDVE ADFPRICAEF SEPLAAGGVI
YDDFLQTTLS DLAVEADGRQ LCLSGVRHGE RYEFTLRAGL PAASGEVLHA PITLRQYVRD
RAPSVRFAGR AYILPASEGG TIPVVGVNTD LIDLALFHVA DRNILRTLQE DYFGRPLAEW
QVDRFAEEIG EAVWQGEAEI AVAQNQSVTT RVPVGEVLEG RAPGLYALEA RVGGAGTSEG
GATQWFLVSD LGLTAMSGAD GVHVFVRSLA TTEAHAGTSV DLISESNRVL ATLETDSEGY
AHFPAAIAAG EQGAAPALLT ARQGDMDLAF LSLRDAEFDL SDRGVEGRAP AGPIDVFLTT
DRGIYRAGNT IHLTALARDP QAHAITDLPL TAILTRPDGV EFTRLLLDES GAGGFVASLP
LGVDVPRGTW RLGIHADPDA PPLREVRLLV EDFLPERLDL EIELNADAEM ASFQADYLFG
APAADLPITG RLALRPLSTL PDYPGFRFGR HDAPPEPAFE SMETLMTDAD GAASVGLRLP
TFDGVSHPGQ LTLTAQITEG SGRPVERAAT ATILPDAPLI GIRPLFDGTL PEGVEAPFHL
ITIGTDPMPV RWTLNRVERR YQWYRQSGNW TWEPVTTRQQ IAIGEATLTD EPTSLDLPIE
WGTFELRVES DAGGFAVSSV GFSAGWYGAS DGTDTPDALE VSLDADAYRP GDTATLRIVP
RTGGLALVQV VTDRLIDQQI VQLGDDPQDI TLPVTDEWGA GAYVTATLIR PLETASGPVP
TRAIGLAHAA VAPGLRALEA ALEVPDTMRP RGPMDVALRV DGALPGETVY ATIAAVDLGI
LNLTGFDSPD PQGHYFGQRR LGMAFRDIYG RLIDSRDGAE GRVRQGGDAG AGLRMQADPT
SEDLVALFSG PLTVGADGYA RTSFDMPAFN GTIRVMATAW SDTGIGQAEA DVIVRDPVVI
AASAPRFLAP GDTSSLLLEI THTEGPTGEM ALAIGTTPEI SMFGQIVPSV TLAEGESTRL
RIPFVTADRT GLADITVTLT TPDGIDIIQT LTIPVQSNDP EVAETTRLTL APGESFTIDA
TAFTGFHPQG TRAILSAGPL ARYDVAGLLQ RLDRYPYGCT EQTASRALPL LYLSSVAEAL
DLGTAEDLNI RIEGAIASVL TNQSANGGFG LWRASSGDLW LDAYVTDFLS RARAEGHSVP
DIPFQNALDN LANAVASHPD FENGGQGLAY ALMVLAREGQ ASMGDLRYYA DVKAPEFATA
LALGQLGAAL AMYGDQQRAD AMFIAGFARL TLAGLSEEPR SWRVDYGSHT RDAAGLIALA
ANAGSQTINL PAYVADITPN VADASTQEAV WALLAAHALI DNPSADGLML DGAPVTGPYV
RVLDDAQSQA RVLENTGDRD EVVTLTRFGR PDGPTDAFGN GYRIDREYLT LDGDPVDPTQ
VTQGTRLVTV LTIRNTGAPE GRLMIDDPLP AGFEIDNPNL LQSGDIRALD GVDLRTSPEM
SEFRAERFLS AVNMRGAADQ IRMAYIVRAV SPGEFHHPAA MVEDMYRPTY RAQTASGRIS
VVE
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