| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0263 |
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| Symbol | |
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| ID | 3932701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 265121 |
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| End bp | 267160 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637902606 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_508205 |
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| Protein GI | 89052754 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.371203 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGCA GGATCGCCGC CACCCTTGGC CTGTTGGTCA CAGCGCTACT GTTTGGGGCC
GCCCTGTGGC TCAACACCTG GATAAACGAG ACAGAACTCC CGCCCCTCAC CCTTGAGACC
GGCGTTGAAG TGTTGGACCG CGACGGTGAT CTTCTGCGCG CCTACACGGT TGAGAACGGG
CGCTGGCGCC TGCCCGTGTC CTATGACGCT GTAGATCCCG GCTACATCGA GATGCTGGTC
GCCTATGAAG ATCGTCGCTT CTGGACCCAT CCCGGTGTTG ACCTGCGCGC CTTTGCTCGC
GCCGCCTGGC AACGAGTGAC AACGGGTCGG GTCATTTCCG GCGGGTCAAC GCTGACCATG
CAGGTGGCGC GGTTGTTGGA GGATTCGGGC ACCGGCGAAT GGGGTGGCAA AATCCGCCAG
ATCCGGCTCG CGCTTGCGCT GGAAAGGCAA TTGTCGAAGC AAGAGATACT GACCCTCTAC
CTCCATCTCG CGCCCTTTGG CGGCAACATC GAAGGGGTCC GTGCGGCGAC GTTGACATGG
TTCGGGACTG AACCACACCG CCTCACCGCC GCGCAATCCG CGCTTCTGGT GGCCCTGCCG
CAAGCGCCTA ACTCTCGTCG TCCCGACCGC TTCCCCGACG CCGCCGAAAT CGCCCGCAAC
CGTGTGCTGT CGCGCGCCGT CACCTTCACC GAGCTGACGG AGGAGCAAAT CGCCTGGGCG
CGAGAGGAAC CGATTCCCAC CACCCGCCGC GATTTCCCCG CCCTCGCCCC GCATCTTGCG
GATCGCGCCA TCGTCGAGCG CCCCACGCAG GGCACCCATC ATCTGACCCT CGATGTCGAC
CTGCAACGGC AGATGGAGCG TTTGACCTCC CGCGCGATCA GTCAACTCGG CCCACAGATG
TCAGCGGCGA TTATGGTCAT GGATCATGAA ACCGGCGCGC TTTTGGCCTC CGTTGGATCG
CCGGACTACA CCGATACGAC CCGAGAGGGG TTTGTGGATA TGACGCAGGC CGTGCGGTCT
CCCGGGTCCA CCCTGAAGCC GCTGATCTAT GGTCTCGCCT TTGACGCCGG CGTGCTGCAC
CCGCAGACGC TGATCCAGGA TCGCCCGATC TCCATTTCCG GCTATGCGCC GCAGAATTTC
GACTCGGTCT TTCGGGGGGA GGTCACCGCG GCGCAAGCTC TGCAGCTGTC CCTGAACATC
CCAGCCGTAA CGCTCCTGAA TGATGTCGGA CCCCACCACA TGCTCGCCGC CATGGGGCGT
GCCGGGATGG AGGTTTCCCT TCCAGAAGGG GAGGAACCCG GCCTTGCCAT CGCGCTGGGC
GGGCTTGGGA CCACGATGGA GGATCTGCTC GGCCTTTACG CCGGGATCGC GCGGGGCGGT
ATCGCCACCC CACCCCATTG GCGGCAGGGC GAGGGGGCGG AGGGGCAACG CATCCTGTCA
GAGACGGCAG CCTGGTATCT GGGCGATATT CTGGGCGACG TGGCCCCACC ACCCAACGCA
CCGCGCATCG GGCTCAGCTA TAAGACGGGC ACCAGCTACG GCCACCGTGA CGCTTGGGCG
TTTGGCTTCG ATGGGCAGCA TGTGGTCGGC ATCTGGATGG GCCGCGCGGA TGGGGCGTCC
GTCCCCGGCG CTTTCGGGGC CGCCCTCTCC GCGCCGCTGC TGTTCGAGGC CTTCTCTCGC
ATTGATGAAC ACACCACACC GCGCGCGGCT CCTCCGCCTG GCGCTTTGAC GCTGGCCACC
GCGCAGTTGC CCGGGCCACT ACAGCACTTT GATCCGGGCG CGGATCTGGC AGATGCAGGT
GGCCCGGCAA TCACCTTCCC ACCTGAGGGT GCGGTACTTG CCTATCAACC CGGTCTGCCG
ATCATGGCCC GTGTCGCCGA GGGCACGCCG CCCTTCACAT GGCTCTGGAA TGGCGCGCCG
GTTGCGACCG GTTGGCATGA CCGGGAAATT GCGCTTGAGG CGGATTTAGG GTTCGGGGAA
CTCACCGTCA TCGACGCAAC AGGCCTGGCG GAAAGTCGCG CTGTAGAGGT CTCAAACTAG
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| Protein sequence | MIRRIAATLG LLVTALLFGA ALWLNTWINE TELPPLTLET GVEVLDRDGD LLRAYTVENG
RWRLPVSYDA VDPGYIEMLV AYEDRRFWTH PGVDLRAFAR AAWQRVTTGR VISGGSTLTM
QVARLLEDSG TGEWGGKIRQ IRLALALERQ LSKQEILTLY LHLAPFGGNI EGVRAATLTW
FGTEPHRLTA AQSALLVALP QAPNSRRPDR FPDAAEIARN RVLSRAVTFT ELTEEQIAWA
REEPIPTTRR DFPALAPHLA DRAIVERPTQ GTHHLTLDVD LQRQMERLTS RAISQLGPQM
SAAIMVMDHE TGALLASVGS PDYTDTTREG FVDMTQAVRS PGSTLKPLIY GLAFDAGVLH
PQTLIQDRPI SISGYAPQNF DSVFRGEVTA AQALQLSLNI PAVTLLNDVG PHHMLAAMGR
AGMEVSLPEG EEPGLAIALG GLGTTMEDLL GLYAGIARGG IATPPHWRQG EGAEGQRILS
ETAAWYLGDI LGDVAPPPNA PRIGLSYKTG TSYGHRDAWA FGFDGQHVVG IWMGRADGAS
VPGAFGAALS APLLFEAFSR IDEHTTPRAA PPPGALTLAT AQLPGPLQHF DPGADLADAG
GPAITFPPEG AVLAYQPGLP IMARVAEGTP PFTWLWNGAP VATGWHDREI ALEADLGFGE
LTVIDATGLA ESRAVEVSN
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