| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0261 |
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| Symbol | |
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| ID | 3932699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 262262 |
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| End bp | 263857 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637902604 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_508203 |
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| Protein GI | 89052752 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCCA AAGTTCTCGT CTCCGACAAA CTCTCGGAAA CCGCCGTTCA GATCTTTCGC
GATCGCGGCA TTGACGTCAC CTTCGACCCG ACGATTGGCA AGGATAAGGA AAAACTCCTG
TCCGTGATCG ATCAATATGA CGGCCTCGCC ATTCGCTCCG CCACAAAGGT GACGGAGAAG
ATTATCGCCG CAGCCACGAA CCTCAAGGTC GTGGGTCGTG CCGGGATCGG GGTCGACAAC
GTCGATATCC CCGCCGCGTC CAAGAAGGGC ATCATCGTGA TGAACACGCC TTTCGGCAAC
TCCATCACCA CGGCGGAGCA CGCTATCGCG ATGATGTTCG CGGTTGCCCG TCAGATCCCG
GAGGCGAGCA CGTCGACCCA TGATGGCAAG TGGGAGAAGT CGAAATTCAT GGGGGTGGAG
CTGACGGCCA AGACCCTCGG TGTGATCGGT GCGGGTAACA TTGGGTCCAT CGTGATCTCC
CGCGCCTTGG GGCTGAAGAT GAAAGTGATC GCCTATGATC CGTTCCTGTC GGAAGAACGT
GCAAAGGAAA TCGGCTGCCA GAAGGTCGAA CTCGATGAGC TGCTGAAGCG CGCGGATTTC
ATCACCATGC ATGTGCCGTT CACGGAGAAG ACGGCGAATA TCCTGTCCGC GGAAAACCTC
GCCAAAACCA AGAAGGGTGT GCGGATCGTG AACTGCGCGC GCGGCGGTCT GGTGGATGAA
GCGGCCCTTG CGGAGCTGCT GAAATCCGGC CACGTCGCCG GGGCTGCCTT CGACGTCTTC
GCGCAGGAAC CCGCGACCGA GAACCCGCTG TTCCATCTGC CCAATGTCGT CGTGACGCCT
CATCTGGGGG CTGCCACGAC GGAAGCGCAG GAAAACGTCG CCCTGCAAGT GGCCGAACAG
ATGTCGGATT TTCTGCTATC CGGTGCCGTG TCCAACGCGC TCAACATGCC GTCTGTCACC
GCAGAGGAAG CGGCGATCAT GGGCCCGTGG GTCAAACTGG CCGAGCATCT GGGCGCCTTC
GTCGGGCAGC TCACTGAAGA GCCGATCCAA AGCATCGACG TGGTCTACAA TGGTGTGGTT
ACCGGCATGA ACCTAAAGGC GCTGGATTGC GCCGCGATTG CCGGTGTGAT GAAGGCGACA
AATCCGGACG TAAATATGGT CTCCGCCCCC GTGATCGCCA AAGAACGCGG CATCGACCTG
TCCCAGACGA CGCAAGACAA GACGGGCGTG TTCGATGGCT ACATCCGCTT GGTGGTGAAG
ACCGACAAGC GCGAACGGTC GATTGCGGGC ACTGTCTTCA GCGACGGCAA GCCGCGGTTC
ATCCAGATCA AGGGCATCAA CATCGATGCC GAGATCGGGG AGCATATGCT CTACACCACG
AACCACGACA TTCCCGGCAT TATCGGCACA TTGGGCCAGA CGATGGGTGA AAACGGCGTG
AATATCGCTA ACTTTACCCT CGGTCGATCT GGGCGTGACG GGGAAGCGAT CGCGCTGCTC
TACCTTGACG AACAGCCGCC CGCTGACGTC TTGGGCAAGC TGATGGAGAC GGGGTTGTTC
GAATCCGTGA AGCCGCTTCA GTTCGCCGCC GCGTAA
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| Protein sequence | MAPKVLVSDK LSETAVQIFR DRGIDVTFDP TIGKDKEKLL SVIDQYDGLA IRSATKVTEK
IIAAATNLKV VGRAGIGVDN VDIPAASKKG IIVMNTPFGN SITTAEHAIA MMFAVARQIP
EASTSTHDGK WEKSKFMGVE LTAKTLGVIG AGNIGSIVIS RALGLKMKVI AYDPFLSEER
AKEIGCQKVE LDELLKRADF ITMHVPFTEK TANILSAENL AKTKKGVRIV NCARGGLVDE
AALAELLKSG HVAGAAFDVF AQEPATENPL FHLPNVVVTP HLGAATTEAQ ENVALQVAEQ
MSDFLLSGAV SNALNMPSVT AEEAAIMGPW VKLAEHLGAF VGQLTEEPIQ SIDVVYNGVV
TGMNLKALDC AAIAGVMKAT NPDVNMVSAP VIAKERGIDL SQTTQDKTGV FDGYIRLVVK
TDKRERSIAG TVFSDGKPRF IQIKGINIDA EIGEHMLYTT NHDIPGIIGT LGQTMGENGV
NIANFTLGRS GRDGEAIALL YLDEQPPADV LGKLMETGLF ESVKPLQFAA A
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