Gene Jann_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0258 
Symbol 
ID3932696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp259478 
End bp260248 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content60% 
IMG OID637902601 
Producthypothetical protein 
Protein accessionYP_508200 
Protein GI89052749 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCA CGGATTGGGA CGACGCTTAT GCGAATGGCG CCTACATCGA CGGTGCCGAT 
GAGATTGTCG CGGGATGGGC CGAACGTGCA GGCGAAATGG TGCCCGATGA GGTGCTGCCC
GGTGTCGATC TGTATGTGCC GGATGGTGCG GTCAAAGGAC TGACCATCGT GGTCCATGGC
GGCTATTGGA TGGCGTTTTC AGCCCGTGAT TTCGCGCATC TTGCGAAGGG TCCGCGTGCG
ATGGGTCAGG CGGTGGCGAT GATCAACTAT ACGCTCGCGC CGCACGCCCG CATTGCCGAG
ATCACCCAAG AGGTCGCCCG TGCCGTGGCC GTGGCTGCCG CACGCATTGA CGGGCCGATC
CGCCTGACAG GTCATTCCGC CGGAGGGCAT CTGGTGACAC GGATGGTTTG TGCGGCCGTC
TTGCCCGATG AGATCGCTGG CCGAATTGTC CACGTGCTAT CGATTTCTGG GGTCCATGAC
CTGCGCCCCT TGTTGCGCAC GCAGATGAAT GAGACGCTGC GTCTTACGCA AAATGAAGCA
AACGCAGAGA GCCCCGCGCT TTTGATGCCG CGGATAAATA CACGTATAAC GTGTGTAGTG
GGTGCCGAGG AGCGACCGGA ATTTCGGCGC CAATCCGCGC TATTGGCGAG CATCTGGCAA
GGTCTGGGAG CGGACATGCG CGCGGTTGAA CTGCCGCACG TGAATCACTT CACCATCATC
GAAGGACTGG AGCGTCCCGA CGGCGCGCTG ACGCAATTGT TGCTGAGTTA G
 
Protein sequence
MQITDWDDAY ANGAYIDGAD EIVAGWAERA GEMVPDEVLP GVDLYVPDGA VKGLTIVVHG 
GYWMAFSARD FAHLAKGPRA MGQAVAMINY TLAPHARIAE ITQEVARAVA VAAARIDGPI
RLTGHSAGGH LVTRMVCAAV LPDEIAGRIV HVLSISGVHD LRPLLRTQMN ETLRLTQNEA
NAESPALLMP RINTRITCVV GAEERPEFRR QSALLASIWQ GLGADMRAVE LPHVNHFTII
EGLERPDGAL TQLLLS