| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0224 |
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| Symbol | |
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| ID | 3932661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 219780 |
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| End bp | 220487 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637902566 |
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| Product | sigma 54 modulation protein / SSU ribosomal protein S30P |
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| Protein accession | YP_508166 |
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| Protein GI | 89052715 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCATC TCCCAGTGCC TCGCACGGTA TGCCGACCTT TCGACTGCCC CAGCGCACTC
TCTCTGACAT CCAAAATCAT CAAGTTAACA GACACGGCGC CTGCGTCGTG CACCCTTAAA
ACCGGAGGTT ACATGCGGTA TCAGATCAGC GGAAAACAGA TCGAAATCGG CCAGGCGCTG
CAAACTCACG TTCAGGACAA TCTGGGCGGT ATTGCCCAGA AATACGCGGA GCGTCCCACC
GATGCGACCG TCGTCTTTTC CAAATCCGGG CCAGAGTTTG CGTGTGAAAC CACGGTTCAT
CTGTCGACTG GTCTGACTGC CTCCGCGAAG GCCCATGCCC ATGAAATCTA TGCCGCGTTC
GAGGCCACGG CCGATAAGCT GGAAAAACAG CTAAGGCGAT ACAAAAGACG CCTAAAAGAT
CACCACAAAG ACCGCGCGAC CCCCATTGAT GTCTATGGCG GGGCCTCTTA TATCCTCGCC
TCATCGGAGG CCGCAGTGGA CGATGCGGAG CCGGAGACGT TGCAGCCAAT CATCGTGGCC
GAGATGGAAA CCAGTATCCC ATCGCTTTCG GTCGGAGAGG CCGTGATGCA AATGGAGATT
GCGGGCGCAC CCCTGTTGGT GTTCCGCGAG CAAGGGAACG ACAGGGTGAA CGTGGTCTAC
CGCCGGGATG ACGGTAATGT GGGCTGGATT GATCCAAAAA CTACCTGA
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| Protein sequence | MLHLPVPRTV CRPFDCPSAL SLTSKIIKLT DTAPASCTLK TGGYMRYQIS GKQIEIGQAL
QTHVQDNLGG IAQKYAERPT DATVVFSKSG PEFACETTVH LSTGLTASAK AHAHEIYAAF
EATADKLEKQ LRRYKRRLKD HHKDRATPID VYGGASYILA SSEAAVDDAE PETLQPIIVA
EMETSIPSLS VGEAVMQMEI AGAPLLVFRE QGNDRVNVVY RRDDGNVGWI DPKTT
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