| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0223 |
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| Symbol | |
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| ID | 3932660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 219238 |
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| End bp | 219702 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637902565 |
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| Product | PTS IIA-like nitrogen-regulatory protein PtsN |
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| Protein accession | YP_508165 |
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| Protein GI | 89052714 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.928507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCTAT CAACTCTTCT GACGCCGCAA TCGGTGAAGG TCGTGAGCGA CGTCAGCAGC
AAGAAACGAC TGATCCAGTC GATTTCCGAG ATCGCCGAAA CGCTGGTCAA CATCCCCGCC
GCGCGGATCT TTGAGGCGTT GCAGGAACGC GAAAGCCTGG GGCCAACCAG TGTTGGCCAT
GGCATCGCCC TGCCCCATGC GCGTCTGTCG GAAATCAACC GTGTCACGGG CGCGTTCATC
CGCCTGGAGC GCGCGATTGA TTTCGGTGCG GCGGACCGTC AGCCGGTGGA TCTTGTGTTC
ATCCTGCTGG CGCCGCTCGA TTCCGGCGTG GACCATCTGA AAGCCCTTGC ACTTGTGTCC
CGGACGTTGC GCGATCCGGC GCTTTGCACG AAATTACGCG CCAACAGCGA TGCTTCCACG
CTTTACACTC TGCTGACTGA GGGCGAGGCG ACGAAAGCCG CCTAA
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| Protein sequence | MDLSTLLTPQ SVKVVSDVSS KKRLIQSISE IAETLVNIPA ARIFEALQER ESLGPTSVGH
GIALPHARLS EINRVTGAFI RLERAIDFGA ADRQPVDLVF ILLAPLDSGV DHLKALALVS
RTLRDPALCT KLRANSDAST LYTLLTEGEA TKAA
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