| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0217 |
|---|
| Symbol | |
|---|
| ID | 3932654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 211628 |
|---|
| End bp | 212857 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637902559 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_508159 |
|---|
| Protein GI | 89052708 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGCGC TCCGCCTCAG TGTTGTCGTC GTCAGCGTTG GGCGGCCAGA GGCCCTGCGT
CGGTGTCTGA TCAGCCTGTC GCAGCAGGCC AAGGCCGGAT GTGAGGTGAT TGTTGTTGCC
GATACGGTTG GGCAAGCCGC TGTCCGCACC CTGCCTGTCG CTGGCGCGTT GAGGTTGTTG
CCGCAGCGCC AGCCCAACAT CTCCGCCGCG CGCAACGCCG GAATTGCCGC AGCTGGCGGG
GATGTCATCG CGTTCATCGA CGATGATGCC GTGGCTGAGC CGATTTGGTC CCATGCAATC
CTGACTGCGT TTGACGACCC GGACATCGCC GCGGTGACGG GGCCAGTGCT GGGGCGGAAC
GGCATTTCCC TTCAATGGGG TCCGATGGCG GCAAACGGGC TCGCGCAGGA CGCAGAAGTA
GACCCTGACA CCCCGGTCAG AGACGGTTTC GTGCGGAAAC TACAAGGGAC GAACATGGCC
GTTCGCCGCC CGGTTCTGGA GGACATCGGC GGATTTGACG AGGCGCTGCA TTTCTATCTG
GATGACACGG ATATGGCTTT GCGGCTGGGA CGGGCCGGGT TGCGGTCCGC CTGGGTCCCC
CGCGCGGTCG TGCATCACGG GTTTGACGCG AGTGTCCGCA GGTCCCCGAC CCGCGTCCCG
CTGAGCTTGT TCGACATCGG TGCCTCCAGC GCTGTCTTCC TGCGCAAACA CGCGCCGGAT
GATCGTTATG CGGAGGCCCT GCACGCGCTG GAGGCGGCCC AAAGTACCCG GCTGATGCGG
CTGGTCCAGA GGCGGAAGAT CGACCCCGAC CAGATGCGCA CGCTGTTGGA GAGCCTTCGG
GAGGGGATCA AGGACGGACA GAGCCGTGAT AGCCATCAGC CGGAAATCGG CTCTGTTGCG
CAGTATTTCG AGCCCTTTCA AACCATCGAC CCGCCCGCGC ATCAGGTCCT GTCCGGGCGG
TCCTTCCAGC TTGCCCGTCT AAGGGCCCAG GTCGAACAGC TTGTCGCGCA GGGGCAGCCC
GTCAGCCTGT TTGCCTTGGA ACCGACGCCG CGAAAACACA AGGTGCGGTT CACTGACGGC
GGATGGTGGG AGCAGACCGG AGGGCTTTTC GGCCCGTCTG ACCGCAGCGG TCCACGCCTT
CAAATCACCT CGTTTCGTGC CCGTATCGCG GCGGAGGTCA GTCGTATTTC TGCCACGCGC
TGTATAGAGC CTGACAGGAA GAAATATTGA
|
|---|
| Protein sequence | MSALRLSVVV VSVGRPEALR RCLISLSQQA KAGCEVIVVA DTVGQAAVRT LPVAGALRLL
PQRQPNISAA RNAGIAAAGG DVIAFIDDDA VAEPIWSHAI LTAFDDPDIA AVTGPVLGRN
GISLQWGPMA ANGLAQDAEV DPDTPVRDGF VRKLQGTNMA VRRPVLEDIG GFDEALHFYL
DDTDMALRLG RAGLRSAWVP RAVVHHGFDA SVRRSPTRVP LSLFDIGASS AVFLRKHAPD
DRYAEALHAL EAAQSTRLMR LVQRRKIDPD QMRTLLESLR EGIKDGQSRD SHQPEIGSVA
QYFEPFQTID PPAHQVLSGR SFQLARLRAQ VEQLVAQGQP VSLFALEPTP RKHKVRFTDG
GWWEQTGGLF GPSDRSGPRL QITSFRARIA AEVSRISATR CIEPDRKKY
|
|---|
| |