| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0213 |
|---|
| Symbol | |
|---|
| ID | 3932650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 208414 |
|---|
| End bp | 209064 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637902555 |
|---|
| Product | DNA-N1-methyladenine dioxygenase |
|---|
| Protein accession | YP_508155 |
|---|
| Protein GI | 89052704 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3145] Alkylated DNA repair protein |
|---|
| TIGRFAM ID | [TIGR00568] DNA alkylation damage repair protein AlkB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTTGGG GCTGCAAGCG GCAGCACGCG ATGGAATCCG AGGAATTTGC ATTGAGTGTC
GATGTCGGTG GGATTGTGGT GCATCCCGAA CACCTGGACG GGCCGGATCA AGCGGAACTG
GTGGAGCAGG TGCGGCGTGT CGTGCGGTCC GCGCCACTAT ACCGGCCCGA GACGCGGACG
GGACGCAAGA TGTCCGTGCG CATGACGTCT GCGGGGACGT ATGGATGGAT CTCGGACCGG
AGGGGCTATC GCTATGACCG GTGTCATCCG GACGGGCAGG ATTGGCCGCC GATCCCGCCC
ATGGCGCTGG AGATTTGGCG GGCGGTGTCG GGTGTGGCAC AGGATCCGCA AAGTTGTCTG
ATCAACTATT ATGATGCGGG TGCAAAGATG GGGATGCATC AGGACCGGGA TGAAGGGGAT
TTCGACATGC CGGTTGTCTC TGTGTCGCTG GGGGATGAGG CGCTGTTTCG TGTGGGCGGT
CCGAAGCGTG GCGGCAAAAC GCAATCGGTC TGGCTGAAAT CTGGCGATGT GGCTGTAATG
GGCGGAGAGG CCCGTCTGAA CTTCCACGGC ATAGACCGCA TTCGCGCAGG CTCCTCTACG
CTTTTGCCCA ATGGCGGGCG GATCAATCTG ACGATGCGGG TCGTGACATA G
|
|---|
| Protein sequence | MIWGCKRQHA MESEEFALSV DVGGIVVHPE HLDGPDQAEL VEQVRRVVRS APLYRPETRT
GRKMSVRMTS AGTYGWISDR RGYRYDRCHP DGQDWPPIPP MALEIWRAVS GVAQDPQSCL
INYYDAGAKM GMHQDRDEGD FDMPVVSVSL GDEALFRVGG PKRGGKTQSV WLKSGDVAVM
GGEARLNFHG IDRIRAGSST LLPNGGRINL TMRVVT
|
|---|
| |