Gene Jann_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0208 
Symbol 
ID3932645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp199400 
End bp199966 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content61% 
IMG OID637902550 
ProductGrpE protein 
Protein accessionYP_508150 
Protein GI89052699 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.791743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGA GAGACGACGA ATTTTATGAA GATCAGACGG CGGATGCTCA GGACAAGGCG 
GATGTTTCGC TTGCGCCAGA GGATATGTCT GGCACGGACG CTGTGATCGA GGCGCTTGAG
GCGGAGCGGG ATGAGCTGCG CGACCGGATG CTGCGCGCGA TGGCCGAGGC TGAGAATATG
CGCAAACGCG CTGACCGGGA CCGCCGCGAG GCAGAGCAAT ACGGCGGCTC CAAGCTGTCC
CGCGATTTGC TGCCCGTCTA CGACAACATG CGCCGCGCGT TAGATGCTGC GGATGACGCG
ACCCGTGAAG CGGCCAGCGG TCTGGTCGAA GGCGTGGAAC TGACGATGCG CGAGCTGATC
AGCATTTTCG GCAAGCACGG CATCGTGCCC GTTGTCCCCG AAGTGGGCGA ACGCTTTAAT
GCCCAAGAAC ATGAGGCGAT GTTTGAAGCG CCCGTTCCCG GCACCAAAGC GGGCGATATC
ATTCAGGTGA TGTCCGAAGG ATTCCTGCTG CACGATCGCC TTTTGCGTCC CGCGCAGGTC
GGTGTTTCGT CGACGCCAGC TAGCTAA
 
Protein sequence
MGERDDEFYE DQTADAQDKA DVSLAPEDMS GTDAVIEALE AERDELRDRM LRAMAEAENM 
RKRADRDRRE AEQYGGSKLS RDLLPVYDNM RRALDAADDA TREAASGLVE GVELTMRELI
SIFGKHGIVP VVPEVGERFN AQEHEAMFEA PVPGTKAGDI IQVMSEGFLL HDRLLRPAQV
GVSSTPAS