| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0207 |
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| Symbol | hrcA |
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| ID | 3932644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 198317 |
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| End bp | 199381 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637902549 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_508149 |
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| Protein GI | 89052698 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.625753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGACC AAGGCAAAAT CCTGGACGAT CTCAATGACC GCTCGCGAGA GGTCTTTCGC
CGTGTGGTTG AAGGGTATCT GGAGACCGGT GCGCCCGTCG GATCGAGAAC GTTGACGCGG
ACATTGTCCG AGAATGTCTC TGCCGCGACG GTTCGGAATA CGATGCAGGA CCTGGAGCAT
ATGGGCCTTC TGGATAGCCC TCATTCTTCC GCGGGTCGCA TGCCAACGCA ACAGGGTCTG
CGCATGTTCG TCGATGGGTT TCTTGAGGTT GGTGATCTGT CCCGCGACGA TAAGCGAGCG
CTCGACGACA CAATGGGCGA CAATGCGACA GACGTCTCTG GCCTGCTGGA CAGGGTCGGT
TCTGCTCTCT CTTCCGCGAC CCATGGGGCA AGTCTTGTCC TGACCCCAAA GCATGAAGCG
CCGATCCAAC ATATCGAGTT TGTGACGCTG TCGGCGACGC AATGCCTTGT GGTTCTCGTC
TTCTCCGACG GCCATGTGGA GAATCGTTTG TTCACCCCAC CCGCTGGCAT GACGCAAAGC
GCGATGCGGG AGGCCGCGAA TTTCCTGAAT GCGCGGATCG AAGGGCAGAC TGTCAGCACA
ATCCGGGCGC AGCTGGAGGT CGATATCGAA ACCCGCAGGC GCGAGATTGA TGACCTGGCC
TCGGGTCTGA TCGATTCGGG CCTCGCCGTT TGGGATGGAA CCGGCGATAA CACGGCGCGG
TTGATTGTGC GGGGGCGGTC GAATCTCCTC TCTGACAGTC AGGAATCCGA GGATCTCGAT
CGTATTCGAC AGCTTTTCGA CGATCTCGAA CGCAAGCGTG ACATCACCGA ATTCCTTGAA
CTGACGGAAG ATGGCGACGG TGTGCGCATT TTCATTGGCT CAGAGAACAA GTTGTTCTCA
CTTTCGGGTT CCTCTCTGGT GGTGTCTCCC TATATGAACT CTGATCGAAA GATCGTCGGA
GCGGTCGGGG TCATTGGTCC CACCCGTCTG AACTACGGAC GCATCGTTCC GATTGTGGAT
TACACGGCGC AGCTAGTTGG ACGGCTGATT TCCGACCGGT CCTGA
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| Protein sequence | MTDQGKILDD LNDRSREVFR RVVEGYLETG APVGSRTLTR TLSENVSAAT VRNTMQDLEH
MGLLDSPHSS AGRMPTQQGL RMFVDGFLEV GDLSRDDKRA LDDTMGDNAT DVSGLLDRVG
SALSSATHGA SLVLTPKHEA PIQHIEFVTL SATQCLVVLV FSDGHVENRL FTPPAGMTQS
AMREAANFLN ARIEGQTVST IRAQLEVDIE TRRREIDDLA SGLIDSGLAV WDGTGDNTAR
LIVRGRSNLL SDSQESEDLD RIRQLFDDLE RKRDITEFLE LTEDGDGVRI FIGSENKLFS
LSGSSLVVSP YMNSDRKIVG AVGVIGPTRL NYGRIVPIVD YTAQLVGRLI SDRS
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