| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0198 |
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| Symbol | rho |
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| ID | 3932635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 189047 |
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| End bp | 190255 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637902540 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_508140 |
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| Protein GI | 89052689 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAAG AGCTTGAGAT CGAGAACGCT TCCACCATGC GGAAGGGGGA TATGATGTTC
GAGATCCTCC GAGAGCGGGC TGACGAGGGT TGGGAGATCT CCGGTGACGG TGTGTTGGAA
GTGTTGCAGG ATGGGTTCGG ATTCTTACGC AGTCCTGAGG CCAACTACTT GGCCGGGCCC
GACGATATCT ACGTCTCACC GGATATGATC CGACAACACT CGCTGCGTAC GGGTGACACC
GTTGAAGGCG TCATGTCCGC ACCTAAGGAA AACGAGCGGT ATTTCTGCCT GGTGAACGTC
ACGCAGATCA ACTTTGAAGA ACCTGAGAAG GCAAAGCACA AGGTAGCGTT TGATAACCTG
ACACCGCTGT ATCCCGATCA GCGGATGAAC ATGGAGATTG AGGATCCCAC GATCAAGGAC
CGGTCTGCCC GAATTATTGA TCTGGTGTCG CCGATCGGTA AGGGGCAGCG AAGCCTGATT
GTGGCACCGC CGCGGACGGG CAAGACGGTT CTGCTTCAGA ATATTGCTCA TTCGATCGAG
ACCAATCACC CGGAGTGCTA TCTGATCGTA CTTCTGATCG ACGAGCGGCC GGAAGAGGTC
ACCGATATGC AGCGCTCGGT CAAGGGAGAG GTGATTTCCT CCACCTTTGA TGAGCCCGCG
ACCCGCCACG TGGCTGTCTC GGAGATGGTG ATCGAGAAGG CAAAACGTCT GGTGGAGCAC
AAGCGGGACG TTGTGATCTT GCTGGACTCA ATCACGCGCT TGGGTCGAGC TTTCAACACG
GTTGTTCCCT CTTCTGGCAA GGTTCTGACC GGTGGTGTTG ATGCGAACGC CCTGCAGCGC
CCGAAGCGGT TCTTCGGTGC AGCGCGGAAT ATTGAGGAAG GTGGATCGTT GACGATCATC
GCGACGGCAT TGATCGATAC AGGAAGCCGG ATGGACGAAG TGATCTTTGA GGAGTTCAAA
GGAACGGGCA ACAGCGAGAT CGTTCTGGAT CGCAAGATTG CCGACAAGCG CGTGTATCCT
GCCATGGACA TTCTGAAGTC CGGCACGCGG AAGGAAGATC TTCTCGTGGA CAAGGGCGAC
TTGCAGAAAA CGTTTGTGTT GCGGCGCATT CTGAACCCGA TGGGCACGAC GGACGCGATC
GAATTCCTGA TTTCCAAGTT GAAACAGACA AAAACGAACT CAGAATTCTT CGATTCCATG
AATACCTGA
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| Protein sequence | MAEELEIENA STMRKGDMMF EILRERADEG WEISGDGVLE VLQDGFGFLR SPEANYLAGP
DDIYVSPDMI RQHSLRTGDT VEGVMSAPKE NERYFCLVNV TQINFEEPEK AKHKVAFDNL
TPLYPDQRMN MEIEDPTIKD RSARIIDLVS PIGKGQRSLI VAPPRTGKTV LLQNIAHSIE
TNHPECYLIV LLIDERPEEV TDMQRSVKGE VISSTFDEPA TRHVAVSEMV IEKAKRLVEH
KRDVVILLDS ITRLGRAFNT VVPSSGKVLT GGVDANALQR PKRFFGAARN IEEGGSLTII
ATALIDTGSR MDEVIFEEFK GTGNSEIVLD RKIADKRVYP AMDILKSGTR KEDLLVDKGD
LQKTFVLRRI LNPMGTTDAI EFLISKLKQT KTNSEFFDSM NT
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