| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0191 |
|---|
| Symbol | |
|---|
| ID | 3932628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 183871 |
|---|
| End bp | 184578 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637902533 |
|---|
| Product | import inner membrane translocase, subunit Tim44 |
|---|
| Protein accession | YP_508133 |
|---|
| Protein GI | 89052682 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCTCA CGAAGACGTT TTTAACCCAC ACGCCGCGCA GAGGTGCCAT GAACTCCTCC
CTTTTGTCCT TGTTGGTGCT GGCTGGCATC GCGATTTTCC TGATTTTGCG CCTGCGCTCC
GTGTTGGGCA CGCGCGATGG TTTTGAAAAG CCCCCCGTCG CACCTGGATC CAGCCGTCGC
GATGTGCGTC GTGATTTTGA GGTGATCGAA GGGGGCCCCG ACGATGACAT CCTCGACCAT
GTCGATGACG GATCTGACAG CGCCAAGGCT CTGGCCGCGA TGAAAATGGC GGAACCTGGC
TTCCGTGTTG GCGAATTTCT TGGCGGCGCG CGTCAGGCGT ATGAGATGAT CCTGATGGCG
TTTGAGCGGG GCGATGTCGA CGGTCTGCGT CCGTTCCTGG CCGACGACGT GTTGGAAACG
TTTGAGACAG TGATCGACCA GCGCAATGAA CAGGGCCTGT CCATCGAGGC GGAGTTCGTT
GGTGTGCGAG AGATTACCTT GCAAGAGGCC ACGTTTGACC GGTCCGCCGG CGTCGGGGAA
GTAACGGTGC GGTTCATTGG TGAGCTTACT AGCGTTGTGC GCAATGCCGA CGGCGAGATC
ATCGAAGGGG ACGCAACAGA GATCAAACGC CAACGCGATG TCTGGACCTT TGCCCGTAAA
ATGGGCGCCG ATGATCCGAA CTGGGCCCTG GTGGCAACCG ACGGATGA
|
|---|
| Protein sequence | MCLTKTFLTH TPRRGAMNSS LLSLLVLAGI AIFLILRLRS VLGTRDGFEK PPVAPGSSRR
DVRRDFEVIE GGPDDDILDH VDDGSDSAKA LAAMKMAEPG FRVGEFLGGA RQAYEMILMA
FERGDVDGLR PFLADDVLET FETVIDQRNE QGLSIEAEFV GVREITLQEA TFDRSAGVGE
VTVRFIGELT SVVRNADGEI IEGDATEIKR QRDVWTFARK MGADDPNWAL VATDG
|
|---|
| |