| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0190 |
|---|
| Symbol | |
|---|
| ID | 3932627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 182851 |
|---|
| End bp | 183867 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637902532 |
|---|
| Product | MltA |
|---|
| Protein accession | YP_508132 |
|---|
| Protein GI | 89052681 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2821] Membrane-bound lytic murein transglycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.386735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGGC TTGCGGTTGT CTTTGCCCTA TTGATGACGG CGAGTGTCGC TGTGGCCGAT
GAGCCCGTGC AACTTCTTGG ATTTGATGAT CTGGACGGAT GGGCTGCGGA TGATCACTCC
GCGGCCCTTT CCGTGTTTCG GAACACCTGT ATGGATCTTG ATGGGTCGGA CTGGGCGGCG
CTGTGCGAAG TGGCAGACAC GGCGCGGGAC GCCCGCACCT TCTTTGAGCT GTTCTTTCAG
CCCGTCCTCA TTGGTGGCGA AAACCCGGCC TTGTTTACGG GGTATTACGA GCCCGAACTG
ACCGGTTCGC GCACGCGCAC CAGCCGATAT CGCTTCCCTG TCTATCGGAT GCCTCCGGAA
GTGTCTGGCC GCTGGCTGTC TCGCGAAGAG ATCGAGGAAA CACGGGTGTT GGAAGGCCGC
GGACTGGAGA TTGCTTGGGT TGATGACCCG GTTGAGTTGT TTTTCCTGCA AATTCAAGGC
TCTGGTCGGA TCAGAATGAT GGATGGCAGT TTCATCCGCG TCGGGTATGG CGGGCGGAAT
GGGCACGAAT ACCGATCCGT TGGGCAGGAG CTTGTGCGGC GCGGTGTGTA TCATGCCCAT
CAGGTCTCTG CGCAGGTCAT TCAGTCCTGG GTGCGCCGAA ATCCGTCTGC CGGGCGGGAT
CTTCTGCACC ACAATCCCAG CTATGTGTTC TTCCGCGAGG TTGAGATCAC AGATCCCGAT
CTCGGGCCGC TTGGCGCGAT GAACCGAAAC ATCACGCCCC ACCGCACCAT CGCTGTCGAT
CCGGACCACA CACCTCTTGG CGCGCCTGTT TGGATTGAGA AAGATGGAAA CGGCCCGATA
CGACGCCTGA TGATTGCCCA AGACACGGGT GGCGCGATTC AAGGCGCACA GCGTGCTGAT
ATCTTCTTTG GGTTTGGCGA CGATGCGGGC GAGGCTGCCG GCGTCATCCG GGATCCTGGC
CGTATGATCG TGCTGCTTCC GATCGAGCGG GCGCACCAAC TTATCCCGGA CGCATGA
|
|---|
| Protein sequence | MGRLAVVFAL LMTASVAVAD EPVQLLGFDD LDGWAADDHS AALSVFRNTC MDLDGSDWAA
LCEVADTARD ARTFFELFFQ PVLIGGENPA LFTGYYEPEL TGSRTRTSRY RFPVYRMPPE
VSGRWLSREE IEETRVLEGR GLEIAWVDDP VELFFLQIQG SGRIRMMDGS FIRVGYGGRN
GHEYRSVGQE LVRRGVYHAH QVSAQVIQSW VRRNPSAGRD LLHHNPSYVF FREVEITDPD
LGPLGAMNRN ITPHRTIAVD PDHTPLGAPV WIEKDGNGPI RRLMIAQDTG GAIQGAQRAD
IFFGFGDDAG EAAGVIRDPG RMIVLLPIER AHQLIPDA
|
|---|
| |