| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0187 |
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| Symbol | hslU |
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| ID | 3932624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 179780 |
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| End bp | 181096 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637902529 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_508129 |
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| Protein GI | 89052678 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0444321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATC TGACCCCCCG CGAAATCGTC TCGGAACTTG ACCGGTTCAT CATTGGCCAG
TCCGACGCCA AACGCGCCGT GGCCGTGGCC TTGCGCAATC GGTGGCGGCG CAAGCAATTG
GGCGATGACC TGCGCGACGA AGTCTACCCG AAGAATATCC TGATGATTGG GCCCACAGGC
GTCGGCAAGA CCGAAATCTC TCGCCGTCTG GCAAAGCTCG CCAAAGCCCC GTTCATCAAG
GTGGAGGCCA CGAAATTCAC CGAAGTGGGC TATGTCGGAC GTGATGTGGA ACAGATCATC
CGCGATCTGG TTGACGCCGC CCAGGTCATG ATCCGAGAAA ACATGCGCGA AGAGGTTAAA
GCCAAGGCCC ATGACGCGGC AGAGGAGCGT GTGATCGAAG CGCTCGCCGG AAAAGACGCC
CGCGAACAGA CCCGTGACAT GTTCCGCAAG AAACTCCGCG CCGGAGAGTT GGACGATACC
GTGATCGAGC TGGAAGTGGC CGACAATTCC AACCCCCTAG GCGGGTTCGA GATCCCCAGC
CAACCGGGCG GTATGGGTGG CATGGGTCCG GGCATGATGA ACCTGGGAGA TCTGTTCAAA
GGTATGGGCG GGCGCACGGT GAAGCGACGC CTGACGGTCG CCGCAAGCTA TGATTTGCTG
ATCGAAGACG AGGCCGACAA ACTGCTGGAC GCGGAAACCG TCACGAAGGA GGCACTGAGC
GCGGTGGAGC AAAGCGGGAT CGTGTTCATC GACGAGATCG ACAAGGTCTG TGCCAAGTCC
GATGCTCGCG GCGCGGATGT GTCCCGTGAA GGCGTGCAAC GGGATCTGTT GCCACTGATC
GAGGGAACGA CGGTATCGAC CAAGCACGGG CCGGTGAAAA CGGACCATAT CCTGTTTATC
GCATCGGGCG CGTTTCACAT TGCCAAGCCC TCGGACCTGT TGCCGGAACT CCAGGGCCGT
TTGCCGATCC GCGTCAATCT GCGCGCGCTC ACAGAAGATG ACTTTGTACG CATTCTCACG
GAAACGGATA ATGCGCTGAC CCGGCAATAC ACGGCCTTGA TGGCCACGGA AGAGGTGGCG
GTCGAATTTA CCGACGGCGG CATTCGTGCA CTGGCCCATA TCGCGGCGGA GGTGAATGAA
AGCGTAGAGA ATATCGGCGC GCGCAGGCTC TACACCGTGT TGGAACGGGT GTTTGAAGAG
CTGAGTTTCA CCGCGCCAGA CCGTTCAGGC GATGCAGTGA CCGTGGACGA GGCATTCGTT
GAACAGAACC TTGGCGAATT GACCCGGAGT ACGGATCTCA GCCGTTATGT TCTGTGA
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| Protein sequence | MSDLTPREIV SELDRFIIGQ SDAKRAVAVA LRNRWRRKQL GDDLRDEVYP KNILMIGPTG
VGKTEISRRL AKLAKAPFIK VEATKFTEVG YVGRDVEQII RDLVDAAQVM IRENMREEVK
AKAHDAAEER VIEALAGKDA REQTRDMFRK KLRAGELDDT VIELEVADNS NPLGGFEIPS
QPGGMGGMGP GMMNLGDLFK GMGGRTVKRR LTVAASYDLL IEDEADKLLD AETVTKEALS
AVEQSGIVFI DEIDKVCAKS DARGADVSRE GVQRDLLPLI EGTTVSTKHG PVKTDHILFI
ASGAFHIAKP SDLLPELQGR LPIRVNLRAL TEDDFVRILT ETDNALTRQY TALMATEEVA
VEFTDGGIRA LAHIAAEVNE SVENIGARRL YTVLERVFEE LSFTAPDRSG DAVTVDEAFV
EQNLGELTRS TDLSRYVL
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