| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0180 |
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| Symbol | |
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| ID | 3932617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 172454 |
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| End bp | 173431 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637902522 |
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| Product | chlorophyll synthesis pathway, bchC |
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| Protein accession | YP_508122 |
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| Protein GI | 89052671 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCACACCA CAGCAGTCAT ATTGGAAGGA CCGAAGGCTC TGGGCCTGGG ACAGGTTGAC
CTGTGCGCTC CATCCGACGG TGATCTGGTG ATTGATGTGT CGCATTCCGG GATCTCTACC
GGGACGGAGA AATTGTTCTG GTCTGGCCAG ATGCCACCAT TCCCCGGCAT GGGATATCCC
CTCGTGCCCG GATATGAGGC GGCAGGTGAG GTGGTGGAAG CTGCGGCAAA CACAGGCTTC
AAGCCGGGGG ACCGCGTCTT TGTTCCCGGT GCAAATTGCT ATGGTGATGT GAAGGGCCTT
TTTGGTGGCG CATCGGCACG CCTTGTGTCC GCCGCCGACC GAGTTGTGCG GATTGATCCG
GCATTGAAAG CCGAGGGCGC GCTGCTTGCC CTTGCAGCAA CCGCCCGCCA CGCGATGGCA
GGGATGGACA AGCAGTTGCC TGAGCTGATT GTGGGCCATG GCGTCTTCGG GCGCCTTCTG
GCCCGTTTGA CGATTGCCGC CGGTGGGAAA GCGCCCACCG TTTGGGAAAT CGATGCCGAC
CGCGCCCAAG GGGCCACCGG CTACGAGGTC CTGCATCCCG ATGCCGATGA TCGCAAGGAT
TATAGCTGTA TCTACGATGC CAGCGGCCAG TCCGACCTTC TGAACACCTT GATCGCTCGT
CTCAAGAAGG GTGGAGAGAT CGTGCTCGCT GGGTTCTACC CCGAGCCTCT GACCTTCGCG
TTTCCGCCGG CCTTCATGCG CGAGGCGCGG ATGCGTATCG CCGCAGAATG GACGCGCGAT
GACCTGATTG CCACGCGCGA TCTGATCGAC CACGGCGCGC TGAGCCTTGA TGACCTCATC
ACGCACACAC GCAATTCAGA CCAGGCCGCG GAAGCGTATC AGACCGCCTT CGAAGACGCG
GCTTGCCTGA AAATGATCCT GAACTGGGCG CCCTCAAGCC GCGAAGCGAC AGGGCGTAAC
GGGGAGACCG TCCAATGA
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| Protein sequence | MHTTAVILEG PKALGLGQVD LCAPSDGDLV IDVSHSGIST GTEKLFWSGQ MPPFPGMGYP
LVPGYEAAGE VVEAAANTGF KPGDRVFVPG ANCYGDVKGL FGGASARLVS AADRVVRIDP
ALKAEGALLA LAATARHAMA GMDKQLPELI VGHGVFGRLL ARLTIAAGGK APTVWEIDAD
RAQGATGYEV LHPDADDRKD YSCIYDASGQ SDLLNTLIAR LKKGGEIVLA GFYPEPLTFA
FPPAFMREAR MRIAAEWTRD DLIATRDLID HGALSLDDLI THTRNSDQAA EAYQTAFEDA
ACLKMILNWA PSSREATGRN GETVQ
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