| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0172 |
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| Symbol | |
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| ID | 3932609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 165606 |
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| End bp | 166604 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637902514 |
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| Product | photosynthetic reaction center subunit M |
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| Protein accession | YP_508114 |
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| Protein GI | 89052663 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01115] photosynthetic reaction center M subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTACT TCGAATACCA GAATATCTTT ACCCAGGTCC AGGTTCAGGG TGAGCCCGAA
ATGGGGATGG ATGATCAGGG AACGCTGATG CGCGAACGCA CAGGCGCTTC GTTTTCGACC
CTGATCGGCT GGATCGGCAA CGCACAGCTT GGCCCGATCT ACCTCGGCTA TGCCGGTCTG
ATCAGCCTTG CCACCGGTGC GGCCTGGTTC ATGATTGTAG GCTTCAACAT GCTGTCCCAT
GTCGATTGGT CCCTGCCGGA GTTCATTCGC CAGCTGTTCT GGCTGTCGCT AGAGCCGCCC
GGACCCGAAT GGGGCCTGCG GATGCCGCCG CTCAACGATG GCGGGTGGTA CATCATCTCC
AGTTTCTTCC TGCTGGTCTC GGTGATGTTC TGGTGGTTGC GCACCTACAT GCTGGCCGTC
GAGCATCAGA TGGGCAAACA TATCGCCTGG GCGTTTCTCG CTGCAATCTG GCTGTTCCTT
GTGCTGGGTC TCTTCCGCCC GATCCTGATG GGATCGTGGA GTGAAGCCGT TCCCTACGGC
ATCTTCCCGC ACCTGGATTG GACGACAGCG TTTTCCATCC GCTACGGCAA CCTCTACTAC
AACCCGTTCC ATTGCCTCTC GATCGTGTTC CTCTATGGCT CGGTCCTGTT GTTCGCCATG
CACGGCGCGA CGATCCTGGC TGTGTCCCGC TACGGCGGCG ACAGGGAGTT GGAGCAGATC
GTGGACCGCG GCACTGCGTC CGAGCGAGCT GGCCTGTTCT GGCGCTGGAC CATGGGCTTC
AACGCCACGA TGGAAGGCAT CCACAGATGG GCCTGGTGGT TCGCGGTGCT GACCCCGATC
ACTGGCGGCA TCGGCATCCT GTTGACCGGA ACCGTCGTGG ATAACTGGTT CATCTGGGCC
CAGGAACACA ACTTCGCACC CGACTATCTG GGCGCCTATG GCTACGAGGC CTACGGCTCT
TACGAGGACT TCGGCGGCGT CACACGAGGG GAGGAGTAA
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| Protein sequence | MAYFEYQNIF TQVQVQGEPE MGMDDQGTLM RERTGASFST LIGWIGNAQL GPIYLGYAGL
ISLATGAAWF MIVGFNMLSH VDWSLPEFIR QLFWLSLEPP GPEWGLRMPP LNDGGWYIIS
SFFLLVSVMF WWLRTYMLAV EHQMGKHIAW AFLAAIWLFL VLGLFRPILM GSWSEAVPYG
IFPHLDWTTA FSIRYGNLYY NPFHCLSIVF LYGSVLLFAM HGATILAVSR YGGDRELEQI
VDRGTASERA GLFWRWTMGF NATMEGIHRW AWWFAVLTPI TGGIGILLTG TVVDNWFIWA
QEHNFAPDYL GAYGYEAYGS YEDFGGVTRG EE
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