Gene Jann_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0157 
Symbol 
ID3932594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp146694 
End bp147383 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content62% 
IMG OID637902499 
ProductMg-protoporphyrin IX methyl transferase 
Protein accessionYP_508099 
Protein GI89052648 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR02021] magnesium protoporphyrin O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCAA CGCCCACATA TGACGCCACC CGCGACCGGG TCGAGGCCTA TTTCGACCGC 
ACCGCGACCA AGACGTGGGA ACGGCTGACG TCCGACGCGC CCGTCTCTGG CGTGCGCCGG
ACCGTGCGTG CGGGCCGTGA CCGGATGCGC GCGCTGATGC TGTCGCGCCT GCCCAAGGAT
CTGTCGGGGC GTCGCGTGTT GGATGCGGGC TGTGGCACCG GCGCGATGAC CGAGGTTCTC
GCCGCCCGTG GCGCTGAGGT TGTGGCTATT GATATCTCTC CGCAGCTGAT CGACATCGCC
GCCAAGCGTC TGCCCGAGGA TTTGGTGCCG CGCGTGACGT TCCAATCGGG CGACATGCTG
TCCGCCAATC TGGGTGCGTT TGATCACGTC ATGGCGATGG ATTCGATGAT CTATTACACC
GCGCCCGATC TGGGTCGCGC GCTGGCAGGC TTGTCTGAGC GCTGTCCCCA TATCGTCTTT
ACCGTTGCGC CCCGCACGCC TTTCCTGATG GCCTTTTTTG GCCTTGGCAA GCTGTTCCCC
CGCGCCGACC GTTCGCCCGT GATGATCCCC CATGCGCCAA AGCGCATATC TGAGAAATTA
CTTATAAATC AATGCGATAG AACCCTGCTC AAGCTTGAGC AAGTCACGTC CGGCTTCTAC
ATCTCTTCCT GTCTGGAGAT GCGCGCGTGA
 
Protein sequence
MVATPTYDAT RDRVEAYFDR TATKTWERLT SDAPVSGVRR TVRAGRDRMR ALMLSRLPKD 
LSGRRVLDAG CGTGAMTEVL AARGAEVVAI DISPQLIDIA AKRLPEDLVP RVTFQSGDML
SANLGAFDHV MAMDSMIYYT APDLGRALAG LSERCPHIVF TVAPRTPFLM AFFGLGKLFP
RADRSPVMIP HAPKRISEKL LINQCDRTLL KLEQVTSGFY ISSCLEMRA