Gene Jann_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0149 
Symbol 
ID3932586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp139789 
End bp141003 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content61% 
IMG OID637902491 
Product5-aminolevulinate synthase 
Protein accessionYP_508091 
Protein GI89052640 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01821] 5-aminolevulinic acid synthase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTG ACCAGCTGTT TCAAACCCAG CTCGACGCCC TGAAAGACGA GGGCAACTAC 
CGTGTCTTTG CCGAGTTGGA GCGCGCTTGC GGCGAATTTC CCCGCGTGAA GAGCCATGGC
GACCATGGCC CGGATGAGGT GACAGTCTGG TGTTCCAACG ATTACCTCGG CATGGGCAAC
AACCCCAAGG TGATGCAGGT CATGATGGAC ACTGTGGCCA CCTGCGGCAC CGGCGCGGGC
GGGACGCGGA ATATCTCGGG CAACGCGCAT CATCACAAGC TGCTGGAGGC TGAACTCGCC
GACCTCCACG GCAAGGAAGC CGCGTTGCTG TTCACGTCGG GCTATGTGTC GAACTGGGCG
TCGCTGTCGA CATTGGGTTC TCGCTTGCCC AATGCAGTGA TCCTGTCCGA CAGCCTCAAC
CACGCCTCCA TGATCGAAGG CATTCGCCAC GCGAAATGCG ACAAGGTGAT CTGGAAGCAC
AACGACCCCG AGGATCTGGA CCGCAAGCTG GCCGCGCTGC CCGCCAATGC GACGCCCATC
GTGGCGTTTG AGAGCGTGTA TTCCATGGAC GGCGATATCG CGCCGATCGC GGCGATCCTG
GATGTCTGCG AAAAGCACGG TGCGATGAGC TACATTGATG AGGTCCACGC CGTTGGCATG
TACGGCCCCC GCGGCGGTGG CGTGGCCGAG CAGGACGGCT TGATGGACCG GATCACGCTG
ATCGAGGGGA CATTGGGCAA AGCCTTCGGG TGCGTCGGTG GCTACATCAC CGGATCCCAC
GCGCTGATCG ATTTCATCCG GTCCTTCGCG TCCGGTTTTA TTTTCACCAC GGCGCTGCCG
CCTGCTGTGG CGGCCGCTGC CACGGCCTCT GTGAAGCACC TGAAGGAATC GCAATGGGAA
CGCGCGATGC AGAAGCGGCA AGTGGCGCGT CTGCGTGCCC GTCTGGATGC CGAGGGGATC
CCCCATGAGC ACAACCCGTC CCATATCATC CCCGTGATGG TGAAGGATCC GGTCAAGTGT
AAGATGCTGT CCGACATCCT GATGGACCAG TTCGGCATTT ATGTGCAGCC GATCAACTAC
CCCACCGTGC CCAAGGGAAC CGAGCGTCTG CGTTTCACAC CCGGCCCGCT CCATAGCGAT
GCGGACATCG AATATCTTGT GATGGCTCTG AAAACGCTGT GGAAGCAGTG CGCGATTGCG
CATGCGGTTG CGTAA
 
Protein sequence
MNFDQLFQTQ LDALKDEGNY RVFAELERAC GEFPRVKSHG DHGPDEVTVW CSNDYLGMGN 
NPKVMQVMMD TVATCGTGAG GTRNISGNAH HHKLLEAELA DLHGKEAALL FTSGYVSNWA
SLSTLGSRLP NAVILSDSLN HASMIEGIRH AKCDKVIWKH NDPEDLDRKL AALPANATPI
VAFESVYSMD GDIAPIAAIL DVCEKHGAMS YIDEVHAVGM YGPRGGGVAE QDGLMDRITL
IEGTLGKAFG CVGGYITGSH ALIDFIRSFA SGFIFTTALP PAVAAAATAS VKHLKESQWE
RAMQKRQVAR LRARLDAEGI PHEHNPSHII PVMVKDPVKC KMLSDILMDQ FGIYVQPINY
PTVPKGTERL RFTPGPLHSD ADIEYLVMAL KTLWKQCAIA HAVA