| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0146 |
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| Symbol | bchD |
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| ID | 3932583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 136656 |
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| End bp | 138347 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637902488 |
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| Product | magnesium chelatase subunit D |
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| Protein accession | YP_508088 |
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| Protein GI | 89052637 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1240] Mg-chelatase subunit ChlD |
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| TIGRFAM ID | [TIGR02031] magnesium chelatase ATPase subunit D |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGACG CAGAGGGACG CTGGCAAGGG GTCAACCTTG CGGTCGCGTG CCTCGCACTG
GACCCGGCAG CATTGGGCGG ATTCTGGGTC CGCGCGCGCG TTGGACCTGT TCGCGATCAA
CTGGAAAACG GTCTCAAAAC CGCCTTGCAG GGTCTGTCCT TGCGTCGAAT TGCACCAACG
ATGCCCGATG ACGCCTTGTT CGGTGGCATT GACCTGGCCG CAACCCTCGA CACCGGAGTT
CTGACCGAAA CGAGGGGGCT TCTGGCGGAT CCTGGCGTGC TTCTCCTGCC GATGGCGGAG
CGTGTGGAGC CGGGCCTGGC CGGGCGGTTG GCTGGCGCGC TCGATGCGGG TCGTGGCCTG
TCGATCATCG CGTTTGATGA AGGGGCGGAG CCTGGGGAAC GCGCGCCTGA CGCCTTGCTT
GATCGGCTCG CCATCCACAT CGATCTTACC GATCACGCGC TCTCCGACGC GCCCGGTCTG
GCCATTGACC TGGACGCGTT GACCGAGGCG CGCGCACGTT TGCCGCTGAT CAGCACGCCC
GACACTGCAA TAGCCGAACT GGCAGAGGTG GCCGCCCGGC TGGGAATTCT GTCTCTGCGC
GCGCCCTTGC AGGCCCTGGC TGTCGCCCGC GCCTCTGCCG CCTTGTCAGG GGCCGATGAG
ATTGAGGACG CGGACCTTCT GACCGCCGTG GAGCTGGTCC TCGCCCCCCG TGCGACCCGG
ATGCCCGAGG CACCGGAAGA CACCCAGGAT GATCCGCCGC CGCCGCCCGA CGACACCACG
CCAGACCGGC CGGAAGACGA GATTGAAGAA CAACTGGATC TGCCACCCGC CGACATTCTG
CTGGAAGCTG CACGGGCGAT GCTGCCACCG GATCTTCTGG CGCGGCTGGC CCCCGGTAAG
GCAGCCCGTG CCGCCAAAGC CACCGGCTCC GGGGCCGCTA AGACTGGCAA TCGTAGGGGG
CGTCCACTGC CGCCACGCGT TGGACGAATG GGCGGCAACG CACGGGTTGA TCTGGTCGCC
ACGCTTCGCG CTGCCGCCCC TTGGCAGAAG ATCCGGCAAG ACATCACCGG CGTGACGGAC
CGTGTGCATG TGCGGATGTC AGACATTCGT ATTCGGCGCT TCAAAGAGGC GTCAGACCGC
GCGATCATCT TTGTGGTCGA TGCCTCGGGA TCAAGCGCAA TGGCACGGTT GGCAGAGGCC
AAAGGTGCCG TGGAATTGCT GTTGGCAGAA GCCTATTCCC GGCGCGATCA CGTGGCTTTG
GTGGCGTTTC GAGGCGATGG AGCAGAGGTT CTTCTGCCGC CCACGCGATC GCTGGTCCAG
ACGAAGCGCC GATTGGCCAG CCTGCCGGGC GGCGGGGGCT CTCCGCTCGC GGCGGGGCTG
AGGGCGGCGT TGCATCTGGC AGCGTTGGCC AAAGGCAAGG GCATGACGCC CTCGGTCGCT
TTGCTGACTG ACGGTCGCGC GAATGTGGAC CTGACGGGTA CGGCGAACAG GACAACGGCT
GCGGAGGATG CCAGCAATAT GGCCCGTGCG ATCCGAAGCG AGGGCTACCC GGGATTGGTC
ATCGACACAG GTCAACGTCC GACCCGGGGC CTCGACGCCC TGGCCCGCGA AATGGGTGCG
CCCTATCTTC CCCTGCCGCG CGCGGACAGC CGCAACCTCT CACGCGCCGT GGACGCGGCG
TTGACGCCGT GA
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| Protein sequence | MSDAEGRWQG VNLAVACLAL DPAALGGFWV RARVGPVRDQ LENGLKTALQ GLSLRRIAPT
MPDDALFGGI DLAATLDTGV LTETRGLLAD PGVLLLPMAE RVEPGLAGRL AGALDAGRGL
SIIAFDEGAE PGERAPDALL DRLAIHIDLT DHALSDAPGL AIDLDALTEA RARLPLISTP
DTAIAELAEV AARLGILSLR APLQALAVAR ASAALSGADE IEDADLLTAV ELVLAPRATR
MPEAPEDTQD DPPPPPDDTT PDRPEDEIEE QLDLPPADIL LEAARAMLPP DLLARLAPGK
AARAAKATGS GAAKTGNRRG RPLPPRVGRM GGNARVDLVA TLRAAAPWQK IRQDITGVTD
RVHVRMSDIR IRRFKEASDR AIIFVVDASG SSAMARLAEA KGAVELLLAE AYSRRDHVAL
VAFRGDGAEV LLPPTRSLVQ TKRRLASLPG GGGSPLAAGL RAALHLAALA KGKGMTPSVA
LLTDGRANVD LTGTANRTTA AEDASNMARA IRSEGYPGLV IDTGQRPTRG LDALAREMGA
PYLPLPRADS RNLSRAVDAA LTP
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