| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0142 |
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| Symbol | |
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| ID | 3932579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 132239 |
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| End bp | 133252 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637902484 |
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| Product | phytoene synthase |
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| Protein accession | YP_508084 |
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| Protein GI | 89052633 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACC CCGATGATAT GGACCATTGT CGTCATGCGA TCCGCGAAGG GTCGTATTCC
TTCCACGCGG CATCGAAACT TCTGCCGTCT TCCGTGCGCG ATCCGGCCCT TGCGCTTTAT
GCGTTTTGCC GCTTGGCGGA TGATGAGGTC GACTTTGGCG CGGACAAACC AGCAGCCGTT
CTGGCGCTCT CAGAGCGTCT CGAACATGCC TATCAGGGTC GCCCTCGAAA CCATCCGACA
GATCGCGCCT TCACTGCAAT GATTGAAGAA TTCGATATGC CGCGCGCCTT GCCGGAGGCG
TTGTTGGAGG GCCTCGCCTG GGACGGGATG GAGCGGCGCT ATGCCACGCT GTCTGATCTG
CGCAGCTATT CGGCGCGTGT TGCGTCCGCC GTTGGCGCAA TGATGTGCGT GCTGATGCGG
GTCCGTGATG AACAGGCCTT GGCGCGCGCC TGCGATCTGG GCGTCGCCAT GCAGCTGACC
AATATCGCCC GTGATGTCGG CGAAGACGCG GCGGAACGGC GACTGTACCT GCCCACCGAT
TGGCTGGAGG AGGAAGGCAT TGATATCGAG CGTCTTTTCA CCAGTCCCGT GTCGTCCCCG
CGTCTCAAAC GGCTGACAAA ACGGCTGTTG GCGGAGGCGC ACAAGCTCTA TCTCAAGTCC
GAGCCCGGGA TTGGCCGTCT GCCCCTTGCC GCACGTCCCG GCATCTTCGC CGCGCGCCAT
TGTTATGACG CCATAGGGCG CAACCTCGCG CAGCACGGAT ATGACAACGT CAACCGGCGC
GCCACCACGA CGGGGGGTCA CAAGATGCGG CTTCTGGGTC TGTCGATTGT GCGCGCGGGC
CTTGCCAGCA TCCTGCCGGA AAGCCCGGTG ATCTTCGCTC GACCCCTGCC TGAGACGGCG
TTTCTGGTCG AGGCCGCAGC CCACCCCGCG CCCAACAAGG ACGCGTGGAG CGATCCGTTG
CTGTCTGTCC TGTCTCAGCT GAAAGCGCAA GACCGCCCCC ACGCGGCAGA ATGA
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| Protein sequence | MIDPDDMDHC RHAIREGSYS FHAASKLLPS SVRDPALALY AFCRLADDEV DFGADKPAAV
LALSERLEHA YQGRPRNHPT DRAFTAMIEE FDMPRALPEA LLEGLAWDGM ERRYATLSDL
RSYSARVASA VGAMMCVLMR VRDEQALARA CDLGVAMQLT NIARDVGEDA AERRLYLPTD
WLEEEGIDIE RLFTSPVSSP RLKRLTKRLL AEAHKLYLKS EPGIGRLPLA ARPGIFAARH
CYDAIGRNLA QHGYDNVNRR ATTTGGHKMR LLGLSIVRAG LASILPESPV IFARPLPETA
FLVEAAAHPA PNKDAWSDPL LSVLSQLKAQ DRPHAAE
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