Gene Jann_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0141 
Symbol 
ID3932578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp131369 
End bp132238 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content62% 
IMG OID637902483 
Producthypothetical protein 
Protein accessionYP_508083 
Protein GI89052632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACA ATCCCCGTCT TGGCATCTAC CTGATGATCG CCACCACCTT CGTCTTTGCC 
ATGCAAGACG GCATCAGCCG GCATCTGGCA GGCGAATACA ATATCTTCAT GGTCGTGATG
ATCCGCTATT GGTTCTTCGC GGCCTTCGTC ATCACCATCG CATCCCGTCA GGCGGGCGGC
GTGCGCGCGG CGGCGAAAAC AGAACAGCCC GTTCTACAGG CCTTCCGGGG CGTCCTTTTA
GCGGCAGAAA TCTGTGTGAT GGTCGGCGCG TTCGTTCTGC TGGGTCTGGT GGAGGCCCAC
GCGATTTTCA CCTGTTATCC GCTGCTGGTC GCCGCCCTGT CCGGCCCCGT ACTGGGCGAA
AAGGTCGGTT GGAGACGGTG GACGGCCATC GGTATCGGCT TTGTCGGCGT ATTGGTGATC
TTGCAACCGG GCTTTGGCGT CTTCTCGATT TACGCGCTGG TCCCCCTCGC CGCCGCCTTC
ATGTTCGCGC TCTATAATCT GCTGACGCGG TACGCGGCCC GCAAGGATCG CGCTGCGACC
AGCTTCTTCT GGACCGGAAC GGCGGGCGCA CTCGTGATGA CCTGCGTCGG CATCTGGTTC
TGGGAGCCGA TGAGCGGGCC GGATTGGGCT TGGATGGCGC TTCTGTGCGT CACCGGCGCG
ACCGGACATT TCCTGCTGAT CAAGACTTAT GACGTGGCCG AAGCGTCGGC CGTACAACCG
TTCGCCTATC TGCAATTGGT CTTTGCATCC GCCCTCGGGC TTCTGGTGTT CGGCGAGGTC
TTGGCGACAA ACGTGGCCAT CGGGGCGGCG ATCGTGATCT GTGCCGGGCT GTTCACGCTC
TGGCGCACAC GCACCGTGAC GGGGGGCTGA
 
Protein sequence
MTDNPRLGIY LMIATTFVFA MQDGISRHLA GEYNIFMVVM IRYWFFAAFV ITIASRQAGG 
VRAAAKTEQP VLQAFRGVLL AAEICVMVGA FVLLGLVEAH AIFTCYPLLV AALSGPVLGE
KVGWRRWTAI GIGFVGVLVI LQPGFGVFSI YALVPLAAAF MFALYNLLTR YAARKDRAAT
SFFWTGTAGA LVMTCVGIWF WEPMSGPDWA WMALLCVTGA TGHFLLIKTY DVAEASAVQP
FAYLQLVFAS ALGLLVFGEV LATNVAIGAA IVICAGLFTL WRTRTVTGG