| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0136 |
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| Symbol | |
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| ID | 3932573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 126057 |
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| End bp | 127412 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637902478 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_508078 |
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| Protein GI | 89052627 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.100396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCCCG AAGTCGCCCC CGAAGACATC CCGGAAGACA TCGTTGATGC CGAAGCGGAA
GCATTTGACG CCGCCTTGAC GGAAATTACG GGTCTGATGG GCCAGATAGA GACGTTTCTG
GCTTCGCTCT TGCGCACCTG GAATGCCTAT CAGATCGGGA TCGTCATCGC GCTTCTGGCG
GCCGCCTGGC TGATGAAACG CGCCTTTGGG CCGCGTATCC GGACCTGGAT GGCCTCACGG
GAGGGTTGGC CAAAATGGCG CATGCGTGTC CTGGCGATCA TCCATCGTCG CCTGTTCATC
ATCTTTTTCG TCCTTCTGAT CTGGACCTTC GTCTTGATCA TGCGGGAGGT CACCTGGCCA
TCGCGCTCCT TCCTGCTGAC CATCGTGGCG GAACTGGCGA CTGCATGGCT CTTCGTGGTC
TTCGTTACAC GGCTCATCCG CTCTGCCTTC CTGCGCGGCA TCATACGCTA CGGGGCGTGG
ATCTTCGTGA CGCTGGTGAT CCTGGATCTC ACGGATGAGG CCGCGGCACT GCTGGATTCC
GTGGGCTTCA ATCTGGGCGA TGCGCGGCTG TCGCTGCTAA CACTTGTGCA GGCGATCCTC
GTGGTCGCCG CCCTCGTGGT CATCGCGCGT TTTCTGACCA GCACCGCCAC CGGCCGCATC
CAGAAGAACG AGGAAATCTC GCCGTCCATG CAGGTTCTGG CGGTCAAATT CCTGCAAGTC
GCCTTCTACG GCATTGCGAT CTACATGGGG CTGCGGCTGA CTGGTGTGGA CCTGACGGGG
CTTGCCGTCC TGTCCGGTGC GATCGGCGTG GGCCTGGGTT TCGGCCTGCA GAAGGTGGTC
TCCAATCTGG TGTCCGGCGT CATCATCCTG CTGGACAAGT CGATCAAACC GGGTGACGTG
ATTTCGCTGG GGGAGACGTT CGGCTGGATC AACTCGCTTG GCGCGCGCTA TGTCAGCGTC
GTGACCCGGG ACGGGAAGGA ATACCTGATC CCGAATGAGG ATCTGATCAC CAGCCAGGTG
GTCAACTGGT CCCATTCCAA CGAATTCGTG CGCCTCGATA TCTATTTCGG CACAGCCTAC
GGCGATGACC CCCACATCGT GCGCAAACTG GCGATTGAGG CGGCCCAGGG CGTCGAACGT
GTCCTCAGCC ACCGGGCACC GGTTTGTCAC ATCGTGGGCT TCGGAGACAG CTCCGTCGAC
TATATCCTGC GGTTCTGGAT CAAGGACCCG ACGGGCGGGC TCACCAACAT CCGCGGCAAC
GTCTACCTGG CGTTGTGGGA TACGTTCAGC GCCAACAACA TCTCCATCCC ATTCCCGCAG
CGAGAAATCA AGATGTTGGA CAAACAGGAA GATTAG
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| Protein sequence | MDPEVAPEDI PEDIVDAEAE AFDAALTEIT GLMGQIETFL ASLLRTWNAY QIGIVIALLA
AAWLMKRAFG PRIRTWMASR EGWPKWRMRV LAIIHRRLFI IFFVLLIWTF VLIMREVTWP
SRSFLLTIVA ELATAWLFVV FVTRLIRSAF LRGIIRYGAW IFVTLVILDL TDEAAALLDS
VGFNLGDARL SLLTLVQAIL VVAALVVIAR FLTSTATGRI QKNEEISPSM QVLAVKFLQV
AFYGIAIYMG LRLTGVDLTG LAVLSGAIGV GLGFGLQKVV SNLVSGVIIL LDKSIKPGDV
ISLGETFGWI NSLGARYVSV VTRDGKEYLI PNEDLITSQV VNWSHSNEFV RLDIYFGTAY
GDDPHIVRKL AIEAAQGVER VLSHRAPVCH IVGFGDSSVD YILRFWIKDP TGGLTNIRGN
VYLALWDTFS ANNISIPFPQ REIKMLDKQE D
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