| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0128 |
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| Symbol | |
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| ID | 3932564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 117998 |
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| End bp | 119098 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637902469 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_508070 |
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| Protein GI | 89052619 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACC GCTCTTTGCT TATCCTTCCC GGCGACGGGA TCGGCCCCGA GGTGATGGCC
GAGGTGCGGA AGATCATTGA TTGGTTCGGC TCTGCCCGTG GCATCAGCTT CGATGTGTCC
GAAGATCTTG TGGGCGGGGC GGCCTATGAC GCCCACGGCG TGCCGCTGAC GGATGCCACG
ATGGAAAAGG CGCAAAGCGT CGATGCGGTT CTGCTCGGCG CTGTTGGTGG GCCCGCCTAT
GACGATCTGG ATTTCTCGGT GAAGCCGGAA CGGGGCCTGC TGCGCCTGCG CAAGGAGATG
GATCTGTATG CCAACCTGCG CCCTGCCCAG TGTTTTGATG CTCTGGCCGA TTTCTCGTCA
CTGAAGCGCG AGATTGTCTC GGGCCTCGAT ATCATGATCC TGCGGGAGCT GACGTCCGGC
GTCTATTTCG GGGAGCCGCG CGGTATCCAC ACCGAGGGCA ATGAGCGTGT GGGCATCAAC
ACCCAGCGCT ATACGGAAAC CGAGATTGCG CGCGCGGCAC ACTCTGCATT TGAACTGGCG
CGGCGCCGCA ACAACAAGGT CTGCTCCATG GAGAAGGCCA ACGTGATGGA GAGCGGTATC
CTGTGGCGTG ATGTCGTCAA TGAGGTCCAC GCTGCGGATT ATGGCGATGT GCAGCTGTCC
CACATGTATG CCGACAACGG CGCGATGCAG CTGGTGCGCG CCCCCAAGCA ATTCGACGTG
ATCCTGACCG ACAACCTCTT CGGCGATATC CTGAGCGACT GCGCCGCGAT GCTGACCGGA
TCGTTGGGGA TGCTGCCGTC CGCAAGCCTG GGCGCACCGA TGGCGAACGG CAGGCCCAAG
GCGATGTATG AGCCCGTCCA CGGCTCCGCG CCGGACATCA CCGGGCAGGG CAAAGCGAAC
CCCATCGCCT GTATCCTCAG CTTCGCCATG GCGCTGCGCT ACAGCTTCGA TCTGGGCGAC
GAGGCCACGC GCCTTGAGGG CGCTGTCGAA AGCGTTCTTG CCGACGGTGC CCGCACGGCA
GACCTGATGG GGCCGGATGG CGGCACGCCG ATCTCAACGT CACAGATGGG CGACGCCATT
GTCGCCAAGC TGGCGGCGTG A
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| Protein sequence | MTDRSLLILP GDGIGPEVMA EVRKIIDWFG SARGISFDVS EDLVGGAAYD AHGVPLTDAT
MEKAQSVDAV LLGAVGGPAY DDLDFSVKPE RGLLRLRKEM DLYANLRPAQ CFDALADFSS
LKREIVSGLD IMILRELTSG VYFGEPRGIH TEGNERVGIN TQRYTETEIA RAAHSAFELA
RRRNNKVCSM EKANVMESGI LWRDVVNEVH AADYGDVQLS HMYADNGAMQ LVRAPKQFDV
ILTDNLFGDI LSDCAAMLTG SLGMLPSASL GAPMANGRPK AMYEPVHGSA PDITGQGKAN
PIACILSFAM ALRYSFDLGD EATRLEGAVE SVLADGARTA DLMGPDGGTP ISTSQMGDAI
VAKLAA
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