| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0120 |
|---|
| Symbol | |
|---|
| ID | 3932556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 110615 |
|---|
| End bp | 111742 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637902461 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_508062 |
|---|
| Protein GI | 89052611 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGGCA TAACCATGCT GCGCGGCGCC CTGCTGTCAA TGGCGCTTAT CTTCACAACT
GTGCCAGCAA CGGCCCATGA AATCCGCCCC ACGATCGGCG ATATCGAGGT TGGGGAAAGC
ACCGTTACCA TGTCCTTGCG TATCGCGTTG GAGGCGTTGC TGTCCGGTGT CGATCTGAGC
TCTGTCACGG ATACGGACGA GTCGCCGGAG GCCGCCATCT ATGACCGCCT GCGCGCCATG
GAGCCAGCGG AGCTTGAGGC CGAACTGCGC GCTGCCTGGG ACCGGATCGC CCTGGGCTTC
ATCCTTGAGG TGGAGGGTGA GCGGCTGGAG CCGGAGATCA TTGCGGTCCA GATCCCCGGT
GCCGGTGATG TGGAGCTGCC GCGCGACTCG ATCCTGACCG TGGGGGCGGC CTTGCCGGAT
GGCGATGCGG GCGTTCGGGT CGGCCTGTCG CCACAATTCG GCACGTTCAT CCCGCGTCAG
GTCGGTGGCG GCGACGATGC CTATGAGGGG TTCCTGAATG GCGGAGAGCT GACCCCCGAA
CTGCCCCGCA CCGCGATCCT GACCGAGGGC GGGATGGACG TGTTCGTGCG CTACGTGATC
TCGGGCTTTG ACCACATCAT CCCCAAGGGC CTCGACCACA TTCTGTTCGT GTTGGGTCTG
TTCTTTTTCG CCACACAGTT CCGTCCTTTG CTGTGGCAGG TCTCGGCCTT TACATTGGCC
CATACGATCA CGCTGGCGCT TGCGGCGACC GGCGTGGTGT CCGTCCCCGG CAGTGTCGTG
GAGCCGCTGA TCGCGGCCTC CATCGTCTAT CTCGCGGTCG AGAATATCCT TGGCATCGGC
AACACCAAGT GGCGGACCAT TTTCGTGTTC GGCTTCGGGC TGTTGCACGG GTTGGGCTTT
GCCAGTGTCC TGGGGGATTT CGGCATTGCG CAGGGTGCGT TCCTCCAGGC GCTGATCGGT
TTCAACGTCG GCGTTGAGCT GGGGCAACTG GCCGTGATCG CGATCGCCTT TGCGCTGGTG
GGCTGGTTCA TGAAGAAGGA TTGGTATCGC AACGCCATCG TGATCCCGGC GTCACTGGTG
ATTGCGGGTA TCGGGGCGTG GTGGGTCGTG GAACGGACCC TTCTTTGA
|
|---|
| Protein sequence | MVGITMLRGA LLSMALIFTT VPATAHEIRP TIGDIEVGES TVTMSLRIAL EALLSGVDLS
SVTDTDESPE AAIYDRLRAM EPAELEAELR AAWDRIALGF ILEVEGERLE PEIIAVQIPG
AGDVELPRDS ILTVGAALPD GDAGVRVGLS PQFGTFIPRQ VGGGDDAYEG FLNGGELTPE
LPRTAILTEG GMDVFVRYVI SGFDHIIPKG LDHILFVLGL FFFATQFRPL LWQVSAFTLA
HTITLALAAT GVVSVPGSVV EPLIAASIVY LAVENILGIG NTKWRTIFVF GFGLLHGLGF
ASVLGDFGIA QGAFLQALIG FNVGVELGQL AVIAIAFALV GWFMKKDWYR NAIVIPASLV
IAGIGAWWVV ERTLL
|
|---|
| |