Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0111 |
Symbol | |
ID | 3932547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 100670 |
End bp | 101200 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637902452 |
Product | hypothetical protein |
Protein accession | YP_508053 |
Protein GI | 89052602 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.714642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCTGC TGCGCAACAT CCTGATCGGC CTTGTGTCTC TTGTCGTCGT GCTCGCCATT ATCGGCATGT TTCTCCCGCG CTATGTCTCG GTCGAACGCG ACATCATGGT GAATGCGGCG CCCGAGGACG TGTATCCGCA CGTCAACTCC TTGCAGGCGT TTTCCGAATG GTCGCCCTGG GGCGATATCG ACCCGGACAT GGTGGTGACC TACTCAGGCC CGGAAGAGGG CGTGGGGAAC GTGATGGAAT GGACGTCCGA TCACCCGAAC GTGGGCAACG GGCGACAGGA GATCCTGGAA GTCGTGGAGA ACGAGAGCGT GCGCAGTGCG CTCGACTTCG GCGACATGGG CACGGCTGAG GCGTGGTGGC GGCTGACACC GGACGGGGAC AGCACCCGCG TGGTCTGGGG CCTGACCGCG GATATGGGCG GCGGGCCAGT CGGGCGATGG TTCGGCCTGA TGATGGACAG CTGGGTCGGC CCGGATTACG AACGTGGGCT GGACCGGTTG CAGGCGTCCG TCGAGGGCTG A
|
Protein sequence | MRLLRNILIG LVSLVVVLAI IGMFLPRYVS VERDIMVNAA PEDVYPHVNS LQAFSEWSPW GDIDPDMVVT YSGPEEGVGN VMEWTSDHPN VGNGRQEILE VVENESVRSA LDFGDMGTAE AWWRLTPDGD STRVVWGLTA DMGGGPVGRW FGLMMDSWVG PDYERGLDRL QASVEG
|
| |