Gene Jann_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0108 
Symbol 
ID3932544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp98574 
End bp99224 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content60% 
IMG OID637902449 
Productcarbonate dehydratase 
Protein accessionYP_508050 
Protein GI89052599 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.032472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCG TGAACTCCCT GCCCGATTAC CTGCTGGACC GGTACAAGGA CTGGAAGGAC 
CAGAGCTTTC CCGAGAACCG CGACTGGTTC CGCAAACTGG CCGATGAAGG CCAGCATCCA
CGGGCCATGG TGATTGCCTG CTGCGACAGC CGCGTCGCGA TCAACTCCGT CTTCGGCCAG
CGCACCGGAG AGCTGTTTGT CCACCGCAAC ATTGCCAATC TGGTGCCGCC CTATACGCCC
GACGGCAATC ACCACGGCAC CGGGGCGGCG GTCGAATTTG CCGTCAAACA TCTTAAAGTC
GAACATATTC TGGTGATGGG CCATTCCAAT TGCGGCGGTG TGGCGGGGTG TATTTCAATG
TGCGAAGGCA CTGCGCCGGA ATTTGATCAA GAGGAAAGCC TGATCGGCCG CTGGCTGGAC
GTGCTGCGCC CGGGGTATCA GACCGTCTCG GACATCGAAG ACCCCAAGGG GCGTCAGACC
GCGCTGGAGA AGGAGGGGAT TCATGTCAGC CTGGAGAACC TTCTGGGCTA TCCCTTCGTG
AAATCCGCCG TGGATGCCGA AACGCTCAGC CTGCACGGAT TATGGGCCGA CATCGCGGAT
ATGGATCTGG AGATGTTTGA CGGACGGGTC CGCCATTTTA CACCTGCGTG A
 
Protein sequence
MHRVNSLPDY LLDRYKDWKD QSFPENRDWF RKLADEGQHP RAMVIACCDS RVAINSVFGQ 
RTGELFVHRN IANLVPPYTP DGNHHGTGAA VEFAVKHLKV EHILVMGHSN CGGVAGCISM
CEGTAPEFDQ EESLIGRWLD VLRPGYQTVS DIEDPKGRQT ALEKEGIHVS LENLLGYPFV
KSAVDAETLS LHGLWADIAD MDLEMFDGRV RHFTPA