Gene Jann_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0100 
Symbol 
ID3932536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp92904 
End bp93320 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content58% 
IMG OID637902441 
Producthypothetical protein 
Protein accessionYP_508042 
Protein GI89052591 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCTC TTATCTCGGT CACACTTTGG AACGTCGTTC TGCTTGGTGT TCTGCTGCTC 
CTACAACCTC TCGTGCGCGA TATTGTCGTC GGCTTCAAAT ACACGATCTC CAACTTCGAC
AATCGCGTCG ATGAAGGCGT GTTTGCGCGT CGCTTGGCGA TGGTCCGCTC CAACCAGATA
GAGGCGCTTG CCCTTTGGGT GCCCGTCATT CTGATCGCTG GCATCGCGGT GCCTGACCTG
ACCCATCCGC ATCTGGCTCT GATTGCCACG GTGTTCCTGA TCGCGCGGAT TGCCTATGCA
ATCATGTCCC TTGCGGGCAT CCCTCTCCTG CGATCCGGCG CGTGGACGGT CGGCTTTGCC
GCCTGGGCCT GTCTGACATG GATCATCAGG TCCGCAATGG GAGGGATAGG CGCATGA
 
Protein sequence
MDSLISVTLW NVVLLGVLLL LQPLVRDIVV GFKYTISNFD NRVDEGVFAR RLAMVRSNQI 
EALALWVPVI LIAGIAVPDL THPHLALIAT VFLIARIAYA IMSLAGIPLL RSGAWTVGFA
AWACLTWIIR SAMGGIGA