| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0089 |
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| Symbol | |
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| ID | 3932525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 84769 |
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| End bp | 85635 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637902430 |
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| Product | farnesyl-diphosphate synthase |
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| Protein accession | YP_508031 |
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| Protein GI | 89052580 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.930006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCAAGA CGGCGCTGAG GGATGCGCAA ACCCGTATCG GCGATTTTCT GACGCGGCAA
CTGGCGGACC TTGGGGATGA CACGATCGCC CAGGGGATGC GCTATGCGAC GGGCGGCGGC
AAACGCCTGC GTGGATTTCT GGCGCTGGAA AGTGCGGCGC TGTTTGATGT GCCCCCCGGG
CAGGCGCTGT ACGCGGCGGG GGCTGTGGAA TGTCTTCACG CCTATTCCCT GGTGCATGAT
GATCTGCCGT GTATGGACGA CGACGACCTG CGTCGGGGGC AACCGACGGT GCATAAGAAA
TGGGATGACG CGACCGCCGT TCTGGTCGGC GATGCCCTGC AAACCTTTGC GTTCGAGTTG
ATCAGCCGCG AGGACGCTGG AACAGCGGAG GAGCGTGTGG CCCTGACAGC GAGCCTCGCG
AAAGCGAGCG GAGCGCAGGG AATGGTTCTG GGCCAGGCCC AGGATATTGC AGCGGAAACC
GCAGGTCGCG CGCTGACCCT GCAAGAGATC ACCGGCCTGC AAGCCAACAA GACCGGTCGC
CTGATCGAAT GGCCCGCCCA TGCCGGTGCA GTGCTTGGTG GTGCCGATCC CGCGCCTTTG
CAGCGCTACG CGCGGGCCAT CGGCCTGGCC TTTCAGATCG CCGATGACAT CCTTGATGTC
GAAGGGGATG CGGCCAAGGC GGGCAAGGCG CTGCGCAAGG ACGCTGATGC CGGGAAAGCC
ACCTTCGTGT CCCTTCTTGG GATGGAGGCG GCCAAGGCCC GTTCGGCAGC GCTTGTCGCA
GACGCCACTG CGGCACTGGC GCCCTACGGC GATAAGGCGC AGACCCTTCG CGATCTGGCG
CAGTATATAG TGACTCGTGA TAAGTGA
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| Protein sequence | MFKTALRDAQ TRIGDFLTRQ LADLGDDTIA QGMRYATGGG KRLRGFLALE SAALFDVPPG
QALYAAGAVE CLHAYSLVHD DLPCMDDDDL RRGQPTVHKK WDDATAVLVG DALQTFAFEL
ISREDAGTAE ERVALTASLA KASGAQGMVL GQAQDIAAET AGRALTLQEI TGLQANKTGR
LIEWPAHAGA VLGGADPAPL QRYARAIGLA FQIADDILDV EGDAAKAGKA LRKDADAGKA
TFVSLLGMEA AKARSAALVA DATAALAPYG DKAQTLRDLA QYIVTRDK
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