Gene Jann_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0087 
Symbol 
ID3932523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp81982 
End bp82758 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content59% 
IMG OID637902428 
ProductIon transport protein 
Protein accessionYP_508029 
Protein GI89052578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACT TTCGCACCCG CCTCGCCGAT TGGCTCGCGC GTCCCGTCGT CAGCAATTTC 
ATCATCGGCG TGATCATCTT CAACGCCGTG ATCCTGGGGT TGGAAACGTC CGACGGCATC
ATGGCCGCCT ATGGCCCGCT GATCCTGATG CTGGATACGC TGTGCCTGGC GATTTTCGTG
GTGGAGATCG TCTTGAAACT GATCGCCCAC GGCTTCCGCT TCTTCCGCAA TGGCTGGAAC
CTGTTCGATT TCGTGATCGT CGGCATCGCA TTGGTGCCAG CCGCGCAAGG CCTCTCGGTC
CTTCGTGCGC TGCGCATTTT GCGGGTGTTG CGTGTTGTGT CGGCCGTGCC ATCGCTCCGC
CGGGTTGTCG AAGGCCTGTT AACCGCGCTG CCCGGCATGG GATCAGTCTT CCTGCTGATG
TCGATCATCT TCTACATCGG CGCGGTCATG GCGACGAAGC TCTTCTCGGA TCAATTCCCC
GACTGGTTCG GCACCATCGG TCTGTCGCTC TACACACTGT TCCAGATCAT GACGCTGGAA
AGTTGGTCCA TGGGCATCGT CCGCCCCGTG CTGGAGATCT ATCCCTACGC GTGGCTGTTC
TTCGTACCGT TCATCATGGT GACGACCTTC GCGGTGGTGA ACCTGATCGT GGGTCTGGTC
GTGAACTCGA TGCAGGACGC CCATTCGGAG GAAAGCAACG CCGCGACGGA CGCTTACCGC
GACGAGGTGA TGGAGAAGTT GAGGGCGATC GAGGCGCGGC TGGACAAACG CAATTGA
 
Protein sequence
MNDFRTRLAD WLARPVVSNF IIGVIIFNAV ILGLETSDGI MAAYGPLILM LDTLCLAIFV 
VEIVLKLIAH GFRFFRNGWN LFDFVIVGIA LVPAAQGLSV LRALRILRVL RVVSAVPSLR
RVVEGLLTAL PGMGSVFLLM SIIFYIGAVM ATKLFSDQFP DWFGTIGLSL YTLFQIMTLE
SWSMGIVRPV LEIYPYAWLF FVPFIMVTTF AVVNLIVGLV VNSMQDAHSE ESNAATDAYR
DEVMEKLRAI EARLDKRN