Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0087 |
Symbol | |
ID | 3932523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 81982 |
End bp | 82758 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637902428 |
Product | Ion transport protein |
Protein accession | YP_508029 |
Protein GI | 89052578 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGACT TTCGCACCCG CCTCGCCGAT TGGCTCGCGC GTCCCGTCGT CAGCAATTTC ATCATCGGCG TGATCATCTT CAACGCCGTG ATCCTGGGGT TGGAAACGTC CGACGGCATC ATGGCCGCCT ATGGCCCGCT GATCCTGATG CTGGATACGC TGTGCCTGGC GATTTTCGTG GTGGAGATCG TCTTGAAACT GATCGCCCAC GGCTTCCGCT TCTTCCGCAA TGGCTGGAAC CTGTTCGATT TCGTGATCGT CGGCATCGCA TTGGTGCCAG CCGCGCAAGG CCTCTCGGTC CTTCGTGCGC TGCGCATTTT GCGGGTGTTG CGTGTTGTGT CGGCCGTGCC ATCGCTCCGC CGGGTTGTCG AAGGCCTGTT AACCGCGCTG CCCGGCATGG GATCAGTCTT CCTGCTGATG TCGATCATCT TCTACATCGG CGCGGTCATG GCGACGAAGC TCTTCTCGGA TCAATTCCCC GACTGGTTCG GCACCATCGG TCTGTCGCTC TACACACTGT TCCAGATCAT GACGCTGGAA AGTTGGTCCA TGGGCATCGT CCGCCCCGTG CTGGAGATCT ATCCCTACGC GTGGCTGTTC TTCGTACCGT TCATCATGGT GACGACCTTC GCGGTGGTGA ACCTGATCGT GGGTCTGGTC GTGAACTCGA TGCAGGACGC CCATTCGGAG GAAAGCAACG CCGCGACGGA CGCTTACCGC GACGAGGTGA TGGAGAAGTT GAGGGCGATC GAGGCGCGGC TGGACAAACG CAATTGA
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Protein sequence | MNDFRTRLAD WLARPVVSNF IIGVIIFNAV ILGLETSDGI MAAYGPLILM LDTLCLAIFV VEIVLKLIAH GFRFFRNGWN LFDFVIVGIA LVPAAQGLSV LRALRILRVL RVVSAVPSLR RVVEGLLTAL PGMGSVFLLM SIIFYIGAVM ATKLFSDQFP DWFGTIGLSL YTLFQIMTLE SWSMGIVRPV LEIYPYAWLF FVPFIMVTTF AVVNLIVGLV VNSMQDAHSE ESNAATDAYR DEVMEKLRAI EARLDKRN
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