| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0069 |
|---|
| Symbol | |
|---|
| ID | 3932505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 63420 |
|---|
| End bp | 64697 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637902410 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_508011 |
|---|
| Protein GI | 89052560 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | [TIGR02079] threonine dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACCGCCG GGACGGGCCA AGCCGTTGGC ATGACAGATT TTGCCATTGC CGCCAAAGCC
ACGACCGCCG CGCTCAGGGA CCTGTTCCCT GCCACGCCGC TGTTGAAAAA CGCCTATCTG
AGCGAGCGTT TTGGCGCGGA CATTTGGCTG AAGCGCGAAG ATCTTAGCCC GGTCCGCTCC
TACAAGTTGC GTGGTGCGTT CAACGCCATG CGCAAGGTGC GCGCGGAGCG GCCCGAATTG
GTGGATTTCG TCTGTGCCAG CGCGGGCAAT CACGCCCAGG GCGTGGCCTA TGTCTGTGCC
CATTTCGGCG TGCGCGGCAG GGTTTACATG CCGGTCACAA CGCCTGATCA AAAGATTCTG
AAAACGCGCA CTTTCGGGGG CGATGCCGTA GAGATTGTGT TGGAAGGCGA TTTCTTCGAT
GAAACCCAGG CCGCTGCGAA AGCCTATTGC GCAGAGGTCG GCGCCCATTT TCTGTCGCCC
TTCGACGATC CGGATGTGAT CGAGGGGCAA GCCTCCGTCG CGGTTGAGAT GTTGGAGCAG
TTGGGTCGCG CGCCCGATCA TCTGGTGCTG CCCGTAGGTG GCGGTGGCCT GTCGTCGGGC
ATGCTGTCCT ACCTTCGGGA CGTCGGGGCT GACACCCACG CAACGCTGGT GGAACCTGAT
GGCGGGCCTA GCCTCACCGC AGCCCTGAAG ATCGGCGCGC CGCAAACCAT CGAAATTACA
GACACATTCG TGGATGGCGC CGCTGTGGCG CGCATAGGCA ATCGCAACTT CGAGGTGCTG
CGAAACGTCC CGCCCCGCGA CGTGCATCTT GTGTCTGAGA ACAGAATTTG CGTGACAATT
CAGGAGATGC TGAACCTGGA AGGCATCGTA TTGGAACCCG CAGGCGCCCT GTCGGTGACG
GTTCTGGACG AATTGCGCGG GCAGATCGCG GGCAAGACGG TGGTGTGTGT AACCTCTGGC
GGAAACTTTG ATTTCGAACG GTTGCCAGAG GTGAAGGAGC GGGCCCAGAA GTGGCAGGGA
CTGAAAAAGT ATTTCATCCT GCGCCTGCCC CAACGGCCCG GAGCCTTGCG CGATTTCCTC
GACCTCCTTG GGGAGGACGA CAACATCACG CGGTTCGAGT ATCTCAAGAA GAACTCTCGC
AACTTCGGAT CGGTGCTGAT CGGGATCGAA TCCCATCGTG CCGCGAGCTT CCCAGAGCTG
GAAGACCGCG TCGCCTCTCG CGGGTTTGGT TTCCGCGATA TCACCGATGA CCAAATTCTT
GCGGATTTCC TGATCTAG
|
|---|
| Protein sequence | MTAGTGQAVG MTDFAIAAKA TTAALRDLFP ATPLLKNAYL SERFGADIWL KREDLSPVRS
YKLRGAFNAM RKVRAERPEL VDFVCASAGN HAQGVAYVCA HFGVRGRVYM PVTTPDQKIL
KTRTFGGDAV EIVLEGDFFD ETQAAAKAYC AEVGAHFLSP FDDPDVIEGQ ASVAVEMLEQ
LGRAPDHLVL PVGGGGLSSG MLSYLRDVGA DTHATLVEPD GGPSLTAALK IGAPQTIEIT
DTFVDGAAVA RIGNRNFEVL RNVPPRDVHL VSENRICVTI QEMLNLEGIV LEPAGALSVT
VLDELRGQIA GKTVVCVTSG GNFDFERLPE VKERAQKWQG LKKYFILRLP QRPGALRDFL
DLLGEDDNIT RFEYLKKNSR NFGSVLIGIE SHRAASFPEL EDRVASRGFG FRDITDDQIL
ADFLI
|
|---|
| |