| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0050 |
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| Symbol | |
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| ID | 3932486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 45578 |
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| End bp | 46210 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637902391 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_507992 |
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| Protein GI | 89052541 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG AAATGCAGAT CAAGAAAGGT CGCAAGTTCG ACCAGGTCAT CGCCGGTGCG
CGCGCCGTCT TCATGCGTGA GGGGTTTGAA GGCGCATCCG TGGATGAGAT CGCGCGCGAT
GCGGGCGTGT CCAAGGCCAC GCTCTACAGC TACTTCCCCG ATAAGCAGCA TCTGTTTCTG
GAGGTGCTTC GCCAGGAATG TGACGCCCAA TCCGAGGTTG AGGTTCTGTT TCAGCAGACG
GGACTGAGCG TTGAAGAGAA GCTCTGCGTG ATCTGCAAAA AGCTGATCAC TTTCTTCGTC
AGCGATTTTG GCCAGGACAT GTTTCGTGTC TGCGTCGCCG AAGCCAAGCG CTTCCCGGAA
TTGGGCGAGA CCTTCTACGC CAGCGGACCC AAACATTGGG GCGAGAAAAT CGCGGGCTTT
CTGTGCAGCG ACAAAGCCCG CGCGGTGCTG GATATCGAAG ACCCGCTGTT GGCCGCCGAT
CAGCTGGCGC AACTGTGCCG CACAGATCTG ATGCTGAAGG TCATGTTCGG GATCGAAAAG
GATCCGGCTG AAGAAGAACT GGACCGTATC GTGGACGAGG CCGTGCGGAC ATTCCTGGCC
CGATATCGCC GTGTCCCCCG GGCGATGGGT TAG
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| Protein sequence | MNAEMQIKKG RKFDQVIAGA RAVFMREGFE GASVDEIARD AGVSKATLYS YFPDKQHLFL
EVLRQECDAQ SEVEVLFQQT GLSVEEKLCV ICKKLITFFV SDFGQDMFRV CVAEAKRFPE
LGETFYASGP KHWGEKIAGF LCSDKARAVL DIEDPLLAAD QLAQLCRTDL MLKVMFGIEK
DPAEEELDRI VDEAVRTFLA RYRRVPRAMG
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