Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_0050 |
Symbol | |
ID | 3932486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 45578 |
End bp | 46210 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637902391 |
Product | TetR family transcriptional regulator |
Protein accession | YP_507992 |
Protein GI | 89052541 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAG AAATGCAGAT CAAGAAAGGT CGCAAGTTCG ACCAGGTCAT CGCCGGTGCG CGCGCCGTCT TCATGCGTGA GGGGTTTGAA GGCGCATCCG TGGATGAGAT CGCGCGCGAT GCGGGCGTGT CCAAGGCCAC GCTCTACAGC TACTTCCCCG ATAAGCAGCA TCTGTTTCTG GAGGTGCTTC GCCAGGAATG TGACGCCCAA TCCGAGGTTG AGGTTCTGTT TCAGCAGACG GGACTGAGCG TTGAAGAGAA GCTCTGCGTG ATCTGCAAAA AGCTGATCAC TTTCTTCGTC AGCGATTTTG GCCAGGACAT GTTTCGTGTC TGCGTCGCCG AAGCCAAGCG CTTCCCGGAA TTGGGCGAGA CCTTCTACGC CAGCGGACCC AAACATTGGG GCGAGAAAAT CGCGGGCTTT CTGTGCAGCG ACAAAGCCCG CGCGGTGCTG GATATCGAAG ACCCGCTGTT GGCCGCCGAT CAGCTGGCGC AACTGTGCCG CACAGATCTG ATGCTGAAGG TCATGTTCGG GATCGAAAAG GATCCGGCTG AAGAAGAACT GGACCGTATC GTGGACGAGG CCGTGCGGAC ATTCCTGGCC CGATATCGCC GTGTCCCCCG GGCGATGGGT TAG
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Protein sequence | MNAEMQIKKG RKFDQVIAGA RAVFMREGFE GASVDEIARD AGVSKATLYS YFPDKQHLFL EVLRQECDAQ SEVEVLFQQT GLSVEEKLCV ICKKLITFFV SDFGQDMFRV CVAEAKRFPE LGETFYASGP KHWGEKIAGF LCSDKARAVL DIEDPLLAAD QLAQLCRTDL MLKVMFGIEK DPAEEELDRI VDEAVRTFLA RYRRVPRAMG
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