Gene Jann_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0042 
Symbol 
ID3932478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp40821 
End bp41201 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content60% 
IMG OID637902383 
Producthypothetical protein 
Protein accessionYP_507984 
Protein GI89052533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTTT CAAGCAAAGC CATTTTCACT GCACTTACCC TGTCTCTTTT GCCTGTAGCC 
GCCTCTGCGC AGATCTTCGT CTCCCCGGCA GCACCTGGTG CGGGGGGATC CTACATCAAC
GGTGTCGCAA TCCCCGGACA TCTCCAAGGC GGCGTGCAGG TCCTGCCAGG CCAAGGGCCC
ATCGGCGGAC CTGTCCAGGT CCAGGGCTGT GGCGCCGCGC AGTACCAGTC TCTCATTGGC
CATCACCAAA GTGCGGTGCC GATGCCATCC CATGCGGCCA TCGTCCATCC CGGCATGATC
CGTACGACCC AATACATCGC GACGCGCCTC AACGTGTCGT TGACTCAGAA CGGCTATGTA
GATCGCGTCT ATTGCGGTTA A
 
Protein sequence
MSFSSKAIFT ALTLSLLPVA ASAQIFVSPA APGAGGSYIN GVAIPGHLQG GVQVLPGQGP 
IGGPVQVQGC GAAQYQSLIG HHQSAVPMPS HAAIVHPGMI RTTQYIATRL NVSLTQNGYV
DRVYCG