| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0033 |
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| Symbol | |
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| ID | 3932469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 30186 |
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| End bp | 31061 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902374 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_507975 |
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| Protein GI | 89052524 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTCC AAGGCTCGAT GCCCGCTCTG GTCACTCCGA TGACAAATGG TGCTGTGGAC
TTTGAGGTGC TGAAACGTCT GGTCGACTGG CATGTGGAGG AAGGCTCCAA CGGGTTGGTG
CCTGTGGGGA CGACGGGTGA AAGCCCCACG CTGACCCATG AAGAGCATGA GCAGGTGATT
GAGACGGTCG TGAAGGCCGC CGGTGGCCGC GTTCCGGTGA TCGCGGGCGC GGGGTCAAAC
AACACGGCAG AGGCGATGCG CCATGTGCAA CATGCCAAGG ATGTGGGGGC TGATGCCACG
CTTGTGGTGA CGCCTTATTA CAACAAGCCG ACGCAGCGTG GGTTGATCGC CCATTACGAG
GCGTTGGCCG AGGTCGGCAT CCCGATTTTC ATCTACAACA TTCCGGGTCG GTCTGTGGTT
GATATGACGC CCGAGACGAT GGGCGAGCTG GCAAAGCACC CAATGATCAT CGGCGTGAAG
GACGCGACGG CGGACATGGC GCGGGTATCC AGGCAGCGCG AAACCTGCGG CACGGATTTC
GTGCAAATGT CCGCGGAAGA TGCCAGCGCA CTGGGCTTCA ACGCCCATGG CGGTGTGGGG
TGTATCAGCG TCACGGCCAA CGTTGCGCCG AAGTTGTGCG CGGAATTTCA GGCGGCCATG
GGGGCAGGCG ACTATACCGA AGCACTGGCG TATCAGGATC GCCTGATGCC GCTTCACAAT
GCGATCTTCA CGGAGCCGGG CCTCTGCGGC GTGAAATATG CGATGTCGGT GCTGGGCCTA
TGCTCGGACG AGGTGCGTTT GCCGTTGGTG GGCGTCGACG AGTCCACCAA GGCCGCGATT
GAGGCGGCAC TGCGCCACGC GGGCCTGCTG TCGTGA
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| Protein sequence | MMFQGSMPAL VTPMTNGAVD FEVLKRLVDW HVEEGSNGLV PVGTTGESPT LTHEEHEQVI
ETVVKAAGGR VPVIAGAGSN NTAEAMRHVQ HAKDVGADAT LVVTPYYNKP TQRGLIAHYE
ALAEVGIPIF IYNIPGRSVV DMTPETMGEL AKHPMIIGVK DATADMARVS RQRETCGTDF
VQMSAEDASA LGFNAHGGVG CISVTANVAP KLCAEFQAAM GAGDYTEALA YQDRLMPLHN
AIFTEPGLCG VKYAMSVLGL CSDEVRLPLV GVDESTKAAI EAALRHAGLL S
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