| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0031 |
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| Symbol | smpB |
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| ID | 3932467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 28499 |
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| End bp | 28975 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637902372 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_507973 |
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| Protein GI | 89052522 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.891709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAAGA AACCTGATAA TCCAAACTAC AAAGTCATCG CCGAGAACCG GCGGGCCCGC
TTCGATTACG CCATCGAAAG CGATCTTGAG GTTGGGATCA TCCTGGAAGG GTCCGAGGTC
AAGAGCCTGC GGCAGGGACA AAGCAATATC GCCGAAAGCT ATGCCGAGGT GAAGGAGGGT
GAGCTGTGGC TCGTGAACTC CTACATCGCG CCTTATGTGC AGGCCAAGAC GTTCGGGCAC
GAGGAAAAGC GGCGGCGCAA GATGCTGGTG TCGCGCAAGG AGTTGTCGAA GCTGTGGAAC
GCCACCCAGC GTGAGGGCAT GACGCTGGTG CCGATTGTCA TGTACTTCAA TCACAAGGGT
CTGGTGAAGC TGAAGATCGG GATCGCCAAG GGCAAGAAGG CGCAGGACAA GCGCGAAACC
TCGGCCAAGC GCGACTGGAA CCGTCAGAAG GCGCGGCTGC TCAAGCAAAA CGGCTGA
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| Protein sequence | MAKKPDNPNY KVIAENRRAR FDYAIESDLE VGIILEGSEV KSLRQGQSNI AESYAEVKEG
ELWLVNSYIA PYVQAKTFGH EEKRRRKMLV SRKELSKLWN ATQREGMTLV PIVMYFNHKG
LVKLKIGIAK GKKAQDKRET SAKRDWNRQK ARLLKQNG
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