Gene Jann_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0030 
Symbol 
ID3932466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp27505 
End bp28368 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID637902371 
Product3-mercaptopyruvate sulfurtransferase 
Protein accessionYP_507972 
Protein GI89052521 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.918889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG TGATCACCGG GGACGATCCG CAAACGCTGG TCTCGACTGA TTGGCTCGCC 
GCGCATTTCA ACGATCCTGA TCTGCGGATC ATCGACGCAT CGTATTATCT GGCCGAGATG
AACCGGGATG CGAAGGCCGA ATATGACGCG GGCCACATCC CCGGCGCGCG GTTTTTCGAC
ATTGATGACA TCTCCGACGC GCGATCCGAG CTGCCGCATA TGGTGGCCCC GGTGGAGAAG
TTCATGTCCC GCATGCGCGC CATGGGCGTG GGCGATGGTC ATCAGGTGGT GGTCTATGAC
GGACGTGGCG TGTTTTCTGC CGCGCGTGTT TGGTGGAACT TTCGTCTGAT GGGCAAGACA
GATGTCGCGG TCCTGGATGG AGGGCTGCCC AAATGGGTCG CCGAAGGGCG TCCCGTAGAA
GATATGCCGC CGATCATCCG GGACCGTCAC ATGACGGTGC AGCGTCAGGC GCATCTGGTG
AAGGATGTCA CGCAGGTGGC CTCGGCCAGC AAGCTTGGCG ATTGGCAGAT CGTGGACGCC
CGCGCGCCCG CAAGGTTCCG CGGAGAGGAG CCCGAGACGC GACCCGGCCT GCGGGCTGGC
CGTATCCCGA ATTCCAAGAA CGTCCATTAC GCCAGTCTGT TCAAACCCGA TGGCACGATG
AAAGAAGGCG ACGCCCTGCG CGCCGCGTTC GAGGCTGGCG GCGTGGATCT GGACAAGCGG
ATCATCACGA CTTGTGGATC CGGCGTGACG GCAGCGATCC TGATGCTGGG GCTGACGCGT
TTGGGCCATC AGGATGTGTC GCTCTATGAT GGATCATGGT CCGAATGGGG CCAGTTTGAG
CAGTTGAAGG TCGAAACCGG ATGA
 
Protein sequence
MAEVITGDDP QTLVSTDWLA AHFNDPDLRI IDASYYLAEM NRDAKAEYDA GHIPGARFFD 
IDDISDARSE LPHMVAPVEK FMSRMRAMGV GDGHQVVVYD GRGVFSAARV WWNFRLMGKT
DVAVLDGGLP KWVAEGRPVE DMPPIIRDRH MTVQRQAHLV KDVTQVASAS KLGDWQIVDA
RAPARFRGEE PETRPGLRAG RIPNSKNVHY ASLFKPDGTM KEGDALRAAF EAGGVDLDKR
IITTCGSGVT AAILMLGLTR LGHQDVSLYD GSWSEWGQFE QLKVETG