| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0020 |
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| Symbol | |
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| ID | 3932456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 19046 |
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| End bp | 20602 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637902361 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_507962 |
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| Protein GI | 89052511 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000295702 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGAAACC TATACTCCAT TCTGTTTGCA ATCGCGGCCT ATGTGGCCGT GTCCCTGCCT
GCTGCGGCTC AGGAGGCAGC GGCGACACTC GACGAACGGG TCAACGCAGC CTTCGCCAAC
GCCACGGGCT GGTTCGTGAA TTTCATCTTC ATGTCGATCC CCGGCACCAA CTTCCCCTGG
ATCGTCATGT GGCTGGTGAT CGGCGCGACG GTTTTTACCA TCTACTTCGC TGCTGTGCAG
TTTCGGTTCT TCGGCCATGC CATCGGGCTG GTGAAGGGCG ATTACTCCGA TCCCAATGAT
GCGGGCGAGG TCAGCCACTT TCAGGCGCTG GCCACGGCTC TGTCGGGCAC GGTCGGCCTT
GGGAACATCG CGGGCGTCGC GGTTGCCGTT GGTATCGGTG GACCGGGCGC CACGTTCTGG
ATGATCCTTG CGGGTCTTCT GGGCATGGCG TCGAAGTTCA CCGAATGTAC GTTGGGCGTG
AAGTACCGCA ATGAGTACCC CGATGGCACC GTGTCGGGCG GACCGATGTA CTACATCTCC
AAGGGCTTCA ACGAGCTGGG CCTGCCGGGC GGCAAGATCC TCGCGGTCCT GTTTTCCATC
TTCTGTATCC TCGGCGCGCT TGGCGGGGGC AACATGTTCC AGGCCAATCA GGCCCACGCA
CAGATCACCC AGATCACCGG AGATTTCCCC GGCTGGATCA CCGGCCTGAT CTTCGCGGCG
GTCGTCTTCG CGGTCATCGT GGGTGGCATC AAGTCCATCG CCAAAGTGAC GGAAAAGATC
GTCCCGTTCA TGGGCATCCT CTACGTCGGT GCGGCGATCA TCGTGCTGGT CGTCAACTAC
GACATGATCG GCTGGGCGTT TGGTCAGATC TTTGCCGGGG CCTTCACGGG TCTGGGCGTC
GCGGGCGGCT TCGTCGGCGC GTTGATCCAG GGCTTCAAGC GCGCGGCCTT CTCCAACGAG
GCGGGCGTTG GCTCTGCGGC GATTGCCCAC TCTGCGGTGA AAACCAAAGA ACCGATCACC
GAGGGCTTCG TGTCCTTGCT GGAGCCGCTG ATTGACACCG TGGTCATCTG CACGATGACG
GCGCTGGTCA TCATCATCTC TCAGCAGTTG ATCATTGATG AGGCATCGGG CCTTTACATG
CTGAACGAGG CGGGAACGGC GATTGCCACA GTTGATGGCA ACGGCGGTGT TGCCCTGACA
TCGGCGGCGT TTGGGTCAGC GATCAGCTGG TTCCCGTTCG TGCTGGCGAT TGCGGTGATC
CTCTTCGCCT TCTCCACCAT GATCTCGTGG TCGTATTACG GGTTGAAGGC CTGGACGTAT
CTGTTCGGCG AAGGCAAGAC GACGGAGCTG ATCTTCAAGC TCATCTTCTG CGCCTTCATC
GTGATCGGAG CGGCGGCGTC GCTTGGGCCC GTCATCGACT TCTCGGATGC CGCGATCTTC
GCGATGGCGG TGGTCAACAT CTTCTGCCTC TACTTCCTGA TGAAGGTGGT GAAGGCGGAG
TTGTCCTCCT ACAGCGCGCG CCTGAAGTCC GGTGAAATCA GGAAGTTCAG CCACTAA
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| Protein sequence | MRNLYSILFA IAAYVAVSLP AAAQEAAATL DERVNAAFAN ATGWFVNFIF MSIPGTNFPW
IVMWLVIGAT VFTIYFAAVQ FRFFGHAIGL VKGDYSDPND AGEVSHFQAL ATALSGTVGL
GNIAGVAVAV GIGGPGATFW MILAGLLGMA SKFTECTLGV KYRNEYPDGT VSGGPMYYIS
KGFNELGLPG GKILAVLFSI FCILGALGGG NMFQANQAHA QITQITGDFP GWITGLIFAA
VVFAVIVGGI KSIAKVTEKI VPFMGILYVG AAIIVLVVNY DMIGWAFGQI FAGAFTGLGV
AGGFVGALIQ GFKRAAFSNE AGVGSAAIAH SAVKTKEPIT EGFVSLLEPL IDTVVICTMT
ALVIIISQQL IIDEASGLYM LNEAGTAIAT VDGNGGVALT SAAFGSAISW FPFVLAIAVI
LFAFSTMISW SYYGLKAWTY LFGEGKTTEL IFKLIFCAFI VIGAAASLGP VIDFSDAAIF
AMAVVNIFCL YFLMKVVKAE LSSYSARLKS GEIRKFSH
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