Gene Jann_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_0018 
Symbol 
ID3932454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp16714 
End bp17826 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content66% 
IMG OID637902359 
Productputative RNA methylase 
Protein accessionYP_507960 
Protein GI89052509 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000217625 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC CTGGGATATT TCTAGTGGCG GTGCCGGGGC TGGAGGCTCC GCTGGAGGCC 
GAGGCGCGCG CGCTGGGCCT GTCCGGTGTG CAGTCTGTTC CCGGCGGGGT CGCTGCGGAT
GGCGGGTTGG TCGAGGCGGC GCGGGTGAAC CTGTTTGCCC GGTGTGCTGT GCGGGTCCTG
CTGCGCGTGG CGGAGTTCCG GGCGATGCAT CTGGCGCAGC TGGACAAGCG ATCAAAGAAG
GTGGACTGGC GCGCGGTTTT GCGCACGGAC GTGCCCGTGC GGGTGGAGGC CGTGTGCCGC
AGGTCAAAGA TCTACGTGAA CAAGGCGGCG GTGCAACGGG TCAGCGGCGG ATTGGAGGCG
GCGGGTCTTT CCGTGGCGAA AGAGGCTGAC CTCACGGTGA AGGTGCGGAT CGATGATGAT
CTTTGCACGA TCTCCGTCGA TACGACCGGG GAGGCCCTGC ACCGACGCGG CCACAAGGAA
TTTGTCGGAA AGGCCCCGAT GCGGGAAACG ATGGCCGCAG GGTTTCTGGC ACAGATGGGG
TTTGACGGAC GCCAGACGGT GGTGGACCCA ATGTGCGGGT CGGGCACCTT TGTTCTGGAA
GCCGCCGAGA TGGCACTGGG GTTGGTCCCG GGGCGGTCGC GTGGGTTTGC GTTTGAGAAC
ATGGTCGGGG GACGCGACGC GCGGCAGATG TCGGATTCTG GATATTTAGA GAACGGGGAA
TTGGGGGACG ATGCGCGCGC GCGACGGCGG TTCTATGGCT TTGACCGGAA CGATGGCGCG
ATCCGGGGCG CCCGCGCGAA CGCGGAGAGG GCAGGGGTGG CGGATGTCGT GGCGTTTGCA
CAGGGCGCGA TCTCTGACCT TGCACCGCCC GATGGACCGC CCGGCATCGT CATCGTGAAC
CCCCCCTATG GCGGGCGGAT CGGGGAGCGG AAGCTGCTGT TCGGTTTGTA TGGGGCGCTG
GGCGCTGTGC TGGCCGAGCG GTTTGGCGGC TGGTGCGTGG GGATCATCAC CAGCGATGGC
GGCCTGGCGA AAGCCACGGG GCTGGCGCTG GAGGCCGGTG GCCCGGTGGA TCACTCGGGA
ACGAAGATTA ACCTTTGGAA GGGGCAGCTT TGA
 
Protein sequence
MNDPGIFLVA VPGLEAPLEA EARALGLSGV QSVPGGVAAD GGLVEAARVN LFARCAVRVL 
LRVAEFRAMH LAQLDKRSKK VDWRAVLRTD VPVRVEAVCR RSKIYVNKAA VQRVSGGLEA
AGLSVAKEAD LTVKVRIDDD LCTISVDTTG EALHRRGHKE FVGKAPMRET MAAGFLAQMG
FDGRQTVVDP MCGSGTFVLE AAEMALGLVP GRSRGFAFEN MVGGRDARQM SDSGYLENGE
LGDDARARRR FYGFDRNDGA IRGARANAER AGVADVVAFA QGAISDLAPP DGPPGIVIVN
PPYGGRIGER KLLFGLYGAL GAVLAERFGG WCVGIITSDG GLAKATGLAL EAGGPVDHSG
TKINLWKGQL