| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0011 |
|---|
| Symbol | |
|---|
| ID | 3932447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 11684 |
|---|
| End bp | 12589 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637902352 |
|---|
| Product | rhodanese-like protein |
|---|
| Protein accession | YP_507953 |
|---|
| Protein GI | 89052502 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1054] Predicted sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.921465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGTTG TCGCCGCCCT TTACCACTTC ACCCGCTTCG CTGACCCCGA CGCGTTGCGT
GCGCCTTTGC GGAGTATCGC GGAAGCCGGC AATGTGCGTG GGTCGTTGCT GCTTGCGCCC
GAGGGGATCA ATGGGACCAT AGCCGGACCG CGCGCGGGCA TCGATGCCGT GCTGGCGCAT
ATCAAGGGTT TGCCGGGCTG TGCGGGGTTG GAATGGAAGG AATCCACCGC AACGGCGGCA
CCTTTCGGGA AGCTGAAGGT GCGGCTGAAG ACGGAGATCG TGTCGATGGG CGCGCCGGGG
TTGGACCCAG CGGATGTCGG CACCCATGTG GCCCCCGCCG AGTGGAACGC CTTGATCAGT
GCGCCCGATG TGGCCGTGAT CGACACGCGC AACGCCTATG AGGTGGAGAT TGGCACGTTC
GAGGGCGCAG TTGACCCGGC CACCGAGAGC TTCCGCGATT TCCCCGCCTG GTGGCAGGCC
AACAAGCACC GCTTCGCCAA TCAGCGGATC GCGATGTTCT GCACCGGAGG CATTCGGTGC
GAGAAATCCA CGGCTTATCT GAAAGAGCAG GGCGTGGAGG AGGTGTTTCA CCTGAAAGGC
GGGATCCTGA AATACCTGGA GGATGTGCCC GAGGACCAAA GCCTGTGGCA GGGCGGGTGT
TTCGTGTTCG ATGAACGGGT CGCCGTGGGC CATGGGCTTG CGGAACTGCC GTTTGATCTG
TGCCGTGCTT GCCGTCATCC GATCAGCTGC GAGGAGAAGG CGGATTTAGC CTTCGAGGAG
GGCGTATCTT GCCCGCGCTG CATGGATGTC CATTCAGACG CAGACCGCGC GCGGTTCCGG
GAGCGGCAAA AGCAGATCGC CCTGGCGAAA GCCCGGGGCG AGGCGCATCT GGGCGCGGGC
GATTAA
|
|---|
| Protein sequence | MYVVAALYHF TRFADPDALR APLRSIAEAG NVRGSLLLAP EGINGTIAGP RAGIDAVLAH
IKGLPGCAGL EWKESTATAA PFGKLKVRLK TEIVSMGAPG LDPADVGTHV APAEWNALIS
APDVAVIDTR NAYEVEIGTF EGAVDPATES FRDFPAWWQA NKHRFANQRI AMFCTGGIRC
EKSTAYLKEQ GVEEVFHLKG GILKYLEDVP EDQSLWQGGC FVFDERVAVG HGLAELPFDL
CRACRHPISC EEKADLAFEE GVSCPRCMDV HSDADRARFR ERQKQIALAK ARGEAHLGAG
D
|
|---|
| |