| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0006 |
|---|
| Symbol | |
|---|
| ID | 3932442 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 7558 |
|---|
| End bp | 7992 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637902347 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_507948 |
|---|
| Protein GI | 89052497 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.582678 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG CACTTATCAA AACCGCCGCC GTCTCCATCG CTCTGATCGC AACTGTTGGC
GCCGCATCGG CCTGCAACAT CGCAACGGCC AACCAGTTTG GCTGGGACAA CTCCGCCGGC
GTCCAGCAGT TCGGTAACTG CAACAACACT GCCATCGGTC AGAACGGCTG GAACAACACC
GCAGCCGGCA TCTCCAACGG CTTCGCCAAC ACGGTTGTGG TTGGTCAGGA CGGCGCTTGG
AACACTGGCG TTGTTGGTCA GAACGGCTCC TTCAACGCTG GCGCAGTGCA GCAGTCCGGC
GCCCTGAACT ACGGTGAAGT TGTTCAGAAC GGCAACTTCC AGACCGGCGC TGTGATCCAG
TCCGGCGTGG GTAACACCGG TGTCCTGAAC CAGACCGGTA CGGGCAACAC CGCCCTGATC
ATCCAGGCCA ACTAA
|
|---|
| Protein sequence | MKLALIKTAA VSIALIATVG AASACNIATA NQFGWDNSAG VQQFGNCNNT AIGQNGWNNT
AAGISNGFAN TVVVGQDGAW NTGVVGQNGS FNAGAVQQSG ALNYGEVVQN GNFQTGAVIQ
SGVGNTGVLN QTGTGNTALI IQAN
|
|---|
| |