| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0002 |
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| Symbol | |
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| ID | 3932438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1603 |
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| End bp | 2721 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637902343 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_507944 |
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| Protein GI | 89052493 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.474691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCT CCATCGAACG CGCCACATTG CTGCGCGCTG TCAGCCAGGC GCAATCCGTG
GTGGAGCGTC GCAACACCAT CCCGATCCTC GCCAACGTAT TGATTGAGGC CGAGGGAGAG
ACTGTCAGCT TCCGCGCCAC CGATCTGGAC ATTGAAGTCG TCGACAAGGC CCCCGCCCAG
GTGGAGCGTG CCGGGGCCAC GACCGTGTCC GCCGTGACAT TGCACGAGAT CGTGCGCAAA
TTGCCCGACG GATCGCTGGT GTCACTGACG GAAGATACCA CCACGTCGCG ACTTACGATT
GAAGCGGGAC GGTCCTCCTT TCAACTGGCG ACGCTGCCGC GCGAAGATTT TCCCGTCATG
GCGTCAACGG ATTATGCCGC CAATTTCTCG GCCAAAGCGC CGGAGCTGCG ACGCCTGTTC
GACAAGTCCA AGTTTGCGAT CTCGACCGAA GAGACGCGGT ATTATCTGAA CGGTGTCTAT
TTCCACATCG CTGAAGGCGA TAACGGCAAA GCCCTGCGTG CCGTGGCCAC CGACGGCCAC
CGCCTTGCCC GGATCGACAG CGCCCTGCCC GATGGTGCGC AAGAAATGCC CGGCGTGATC
GTGCCTCGCA AGACGGTGGG CGAACTGCGC AAGCTGCTGG ATGATGACGA TGCCCAGATC
GCCGTGAGCG TGTCGGAGAC GAAAATCCGC TTCGCCACGC CAGATATCAC GCTGACCTCC
AAGGTGATCG ACGGCACCTT CCCCGATTAC ACACGCGTCA TTCCAGCGGG CAACACGCGC
CGGATGGAAG TGGATGCGGG CGACTTCGCC AAGGCGGTCG ATCTGGTGGC AACGGTCAGC
TCCGAGCGGT CACGCGCCGT AAAGATGGCG CTGGACGAGG ACCGCCTGAT GCTGTCCGTT
AATGCGCCAG ATTCTGGCAA TGCAGAGGCC GAACTGGTCG TGGCCTATGC CGACGAGAAG
CTGGAGATTG GCTTTAACGC CAAATACTTG CTGGAAATCG CCAGCCAGGT GGACCGGGAG
AACGCGGTTT TCATGTTCTC GTCCCCGGCT GAGCCCACGC TGATGCGCGA AGGCAACGAT
GATAGCGCGA TCTATGTCGT CATGCCCATG CGGGTCTGA
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| Protein sequence | MKLSIERATL LRAVSQAQSV VERRNTIPIL ANVLIEAEGE TVSFRATDLD IEVVDKAPAQ
VERAGATTVS AVTLHEIVRK LPDGSLVSLT EDTTTSRLTI EAGRSSFQLA TLPREDFPVM
ASTDYAANFS AKAPELRRLF DKSKFAISTE ETRYYLNGVY FHIAEGDNGK ALRAVATDGH
RLARIDSALP DGAQEMPGVI VPRKTVGELR KLLDDDDAQI AVSVSETKIR FATPDITLTS
KVIDGTFPDY TRVIPAGNTR RMEVDAGDFA KAVDLVATVS SERSRAVKMA LDEDRLMLSV
NAPDSGNAEA ELVVAYADEK LEIGFNAKYL LEIASQVDRE NAVFMFSSPA EPTLMREGND
DSAIYVVMPM RV
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