| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4278 |
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| Symbol | |
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| ID | 3932430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007801 |
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| Strand | - |
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| Start bp | 74399 |
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| End bp | 76177 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637902335 |
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| Product | ABC transporter related |
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| Protein accession | YP_512218 |
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| Protein GI | 89057764 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGC CATCAGCCCC CCCCAAAAAG GTCATGTTCA ACCAGCAAGA CCGCCAGAAC
CTGCGGTGGT TCTGGCAGTC CTACCTGCGC AGCAAATCCA TATGGCTGCT GATCGTTCTG
GGCATGGTCA GCGTCCAGGG CCTGGTCTAC CAGCAATTCC TGCAACTGAC CGAAAGCGGT
CTGCGGGTGA TCTTTGAGGA CGGCAGCTTC CGGCAGCTGG CGCTGATCTG TGCCTATGTG
TTTTTCCTGT TCGCGGTGCG CGCGGCCCTC TCGTATCTGG TGCCACGCCT GTCGGTCTGG
CTGGCCAGCG ATGCCGTCGT CAAACTGCGC GCCGATCTCA CCGGGCATCT GCTGCAACAG
GATCTGGCCT ATTTTGAGCG CACGAAGGTG GGCGACACGA TCCTGCGCCT GTTCACCCAG
GCCGACGGAC TGGGCGCCTT TGTGGGGGTC ACCACCGTCG GGGCCGCGCG CGATGCGGTG
ACCGTGGTGA TCGTGGCCGG CTACCTGATC TACAAATCGC CGCTGCTGTT TCTGGGGGCC
GTGGTTTTTA TCCCCATCGT GATCTTCATG ATGCAGCTGA TCTCGCACAA GATCAAAGAC
ATCCAGGCCC AGGCTGAAAA CGCCTTTGGA GCTTACATCA ACACCATCGA AGAAATGTCC
AACGGCATGC GGACGGTGAA GATATCGGGC CAGGAGGGGC ACGAGCGCGA CCGCCTGAAC
ACCGCCGCCA TGGGCATGCG CGGTCTGATG ATCCGCCTGC AATCGGCCCA GGCCATGGTT
GCCCCCACCA TCGATCTGGT CTCGGCCTGC GCCTATGTGC TGGTGATCGG TGGCGGCGGT
TACATGGTGA TCAGCGGCGA TTTCGACCTT GATGCTGCGG GGATCATCAC CTTTCTTCTG
GGCCTGACGA TCCTGTTCGA TCCCGCCCGC CGCCTGGCAC AGTTTTTCGC CACGCTTCAG
GCCTCTCTCG TGCTCCTCGA AAGCCTCAAC TCGATCCTGC GGCTGGAACC GACCGTCCAC
GATCTGCCCG GGGCAAAGGA CACGTTTGAC GCCAGCGCCG ATATTCAACT GAACCAGGTG
GACTTCGGCT ATTCGAAGGA TGACCCCCTT TATGAGGGGC TCGACCTGAC GATCAAGGGC
GGGCAGAGCA CGGCGATCGT GGGGGCCACC GGGTCGGGAA AGACCACCGT CCTCAGCCTG
ATCACCCGCC TCTATGAGGT GGATAAAGGC GCCGTCACCA TCGGCGGGGA CAACATCCGC
GACATCAAGG TCAAGGCTCT GCGCAAGGCG TTTTCCGTGG TGGCCCAGGA CATCGTGATC
TTCAACGCCT CCATCTTCGA GAACATCAAA TACGTGCGCC CCGAGGCCAG TGACGATGAG
GTCTGGGCCG CCGCCGAGGT GGCCAATATC GCTGATCTGA TGCGTCAGCG TGGCGATACG
CCTCTGGGGC CCAAGGGCAG CCAGCTGTCG GGCGGACAAA AGCAGCGCAT CGCCATCGCC
CGCGCAGTTC TGCAAGACGC CCCGATCCTG TTGATGGACG AGGCCACGTC GGCGCTGGAC
CAGAAGACCG AGGAAAAGGT GCGAGATGCC CTGGAGCGGG TCTCGGAGGG GCGCACGAGT
GTGATGATCG CCCACCGCCT GTCGACCGTG ATCCACGCCG ACTGGATCTA TGTGCTGGAT
TTCGGGAAGG TCGTGGAACA GGGCACCCAT GCGGACCTGA TGGCCCAGGA CGGGCTTTAT
GCGGCGATGT ATCGCTCGCA GAAGACCGGT TATGAATGA
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| Protein sequence | MTEPSAPPKK VMFNQQDRQN LRWFWQSYLR SKSIWLLIVL GMVSVQGLVY QQFLQLTESG
LRVIFEDGSF RQLALICAYV FFLFAVRAAL SYLVPRLSVW LASDAVVKLR ADLTGHLLQQ
DLAYFERTKV GDTILRLFTQ ADGLGAFVGV TTVGAARDAV TVVIVAGYLI YKSPLLFLGA
VVFIPIVIFM MQLISHKIKD IQAQAENAFG AYINTIEEMS NGMRTVKISG QEGHERDRLN
TAAMGMRGLM IRLQSAQAMV APTIDLVSAC AYVLVIGGGG YMVISGDFDL DAAGIITFLL
GLTILFDPAR RLAQFFATLQ ASLVLLESLN SILRLEPTVH DLPGAKDTFD ASADIQLNQV
DFGYSKDDPL YEGLDLTIKG GQSTAIVGAT GSGKTTVLSL ITRLYEVDKG AVTIGGDNIR
DIKVKALRKA FSVVAQDIVI FNASIFENIK YVRPEASDDE VWAAAEVANI ADLMRQRGDT
PLGPKGSQLS GGQKQRIAIA RAVLQDAPIL LMDEATSALD QKTEEKVRDA LERVSEGRTS
VMIAHRLSTV IHADWIYVLD FGKVVEQGTH ADLMAQDGLY AAMYRSQKTG YE
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