| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_4272 |
|---|
| Symbol | |
|---|
| ID | 3932424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007801 |
|---|
| Strand | - |
|---|
| Start bp | 67846 |
|---|
| End bp | 69132 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637902329 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_512212 |
|---|
| Protein GI | 89057758 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.553747 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.320513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCATC GTGTTCTGAT CCTTGCAGAA AATTGTAACC CGGAATGGCC GTCACTGCCT
ATTGTCGGCT ATAAGTATGC CCGTGCCTTG GCCGCCGTTA CCGACGTCAC CGTGGTCACG
CATCCCCGGA ACGCAGAGAA CATCGAACGC GCTGGCGATA TGGGCGCCAA GGTCCGGTAC
ATTGATAATG AATGGCTGGC GAAGCCTATG TACCGGCTGG CCATGGCGCT ACGCGGCGGA
AGTGAAGTGG CGTGGTCAAC CAATCAGATC ATGGCCTATC TGCCCTATCT GATGTTTGAA
CGGCAGGCCC TGCGCGCGTT TCGCGATGAC TTGCAGACCG GAGCCTTTGA CATCGTGCAC
CGAATCACAC CGATGTCGCC GACGCTGCCA AGCTATATTG CAGGACGCAC AAAACAGCCT
TTCATCATCG GGCCACTCAA CGGCAACCTT GATTGGCCCG AGGCCTTTCG CGCGGAACAG
AAACGGGAGC GGGAAGGCCT GCGGCGCCTG CGCGGCCTGT ATCGCTACCT CCCATATTCC
CGCGGTAGTT TCACCAAGGC GGCCGCGATT CTGTCCTCCT TCGACCATAC CGCTGCAGAT
CTGCCCGCAG GTCTGGAAGA CCGCACGGTT TCATTCCCCG AAATTGGGTT TGATGAAACG
GTATTCCACA GCACCGGCCG AGTGGCGCCG TTCAGCGGCA AAGGGCCTTA CCGGTTTCTC
TATGCCGGGC GGCTCGTGCC ATACAAAGTT CCCGAAGTTG TAATCCGGGC GTTTATCTCT
TCAGAATGCC TCAAGGCGCA CCGGCTTCAT ATTGTGGGTG ATGGACCCGA GCGAGCCCGG
CTCGAAGCGA TGGTTGCCGA AGCGGGCGCT GAGGGTTGGA TCACGTTCGA GGGTCGGAAG
TCTCAGGCCG AAGTCGCCCA TTACATGCGG GATTGCGATG CGTTTGTATT CCCGTCCATC
CGTGAATTGG GTGCCGGGGT AATCATCGAG GCAATGGCCT CGGGAATCGC CTGCATAGTA
ACCGATTACG GAGCCCCGGG GCATCTTGCA GACGGACAAC GTGGGCGACG CGTAGCCTTA
CAAGCTCTCG ACGGCTTAGT GCACGATTAT CGCTTGGCAA TGGAGGCTTG CGTTGAAGCG
CCGGCAGAGC CGCAAGCAAT GGCAGCCCGC GCCGAAACCT ATGCGCGCGA CAATTTCACG
TGGGCGGCAA AAGCGGCACA CACACTGACG ATATATGATG CCATAACGCG CTCTGGGCGC
GTGCCAAAAA TACAGGCTTA TCTATAG
|
|---|
| Protein sequence | MTHRVLILAE NCNPEWPSLP IVGYKYARAL AAVTDVTVVT HPRNAENIER AGDMGAKVRY
IDNEWLAKPM YRLAMALRGG SEVAWSTNQI MAYLPYLMFE RQALRAFRDD LQTGAFDIVH
RITPMSPTLP SYIAGRTKQP FIIGPLNGNL DWPEAFRAEQ KREREGLRRL RGLYRYLPYS
RGSFTKAAAI LSSFDHTAAD LPAGLEDRTV SFPEIGFDET VFHSTGRVAP FSGKGPYRFL
YAGRLVPYKV PEVVIRAFIS SECLKAHRLH IVGDGPERAR LEAMVAEAGA EGWITFEGRK
SQAEVAHYMR DCDAFVFPSI RELGAGVIIE AMASGIACIV TDYGAPGHLA DGQRGRRVAL
QALDGLVHDY RLAMEACVEA PAEPQAMAAR AETYARDNFT WAAKAAHTLT IYDAITRSGR
VPKIQAYL
|
|---|
| |